Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 Gm19326-201ENSMUST00000219818 326 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CtcfQ61164 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm25141-201ENSMUST00000083177 107 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm5670-201ENSMUST00000093546 372 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CtcfQ61164 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm23609-201ENSMUST00000104542 127 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm12213-201ENSMUST00000119924 353 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm15466-201ENSMUST00000122299 333 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Gm6265-201ENSMUST00000149263 231 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm22839-201ENSMUST00000158436 304 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
CtcfQ61164 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Gm28399-201ENSMUST00000186221 318 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm28572-201ENSMUST00000187444 318 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm45730-201ENSMUST00000212560 395 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Olfr575-201ENSMUST00000084812 957 ntBASIC3.2□□□□□ -1.9
CtcfQ61164 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CtcfQ61164 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm14868-201ENSMUST00000117840 216 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm6274-201ENSMUST00000118173 797 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm12793-201ENSMUST00000119268 292 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm23325-201ENSMUST00000157422 129 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm22849-201ENSMUST00000157713 307 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm21893-201ENSMUST00000179119 397 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm22951-201ENSMUST00000179471 107 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm20923-201ENSMUST00000190009 319 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm37715-201ENSMUST00000193206 235 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm43355-201ENSMUST00000196541 346 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.19□□□□□ -1.9
CtcfQ61164 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm44063-201ENSMUST00000203307 376 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm43955-201ENSMUST00000204332 142 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm44858-201ENSMUST00000207360 154 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm44594-201ENSMUST00000208982 407 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Gm45513-201ENSMUST00000210228 376 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CtcfQ61164 Gm23723-201ENSMUST00000082996 132 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.19□□□□□ -1.9
CtcfQ61164 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CtcfQ61164 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CtcfQ61164 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
CtcfQ61164 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CtcfQ61164 Gm9850-201ENSMUST00000117916 227 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm12876-201ENSMUST00000120975 408 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm11849-201ENSMUST00000121293 261 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm24546-201ENSMUST00000158652 102 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm25490-201ENSMUST00000158734 130 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CtcfQ61164 Gm25470-201ENSMUST00000175576 111 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CtcfQ61164 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CtcfQ61164 Mir8116-201ENSMUST00000184134 97 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm28717-201ENSMUST00000189950 315 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm43932-201ENSMUST00000204499 52 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CtcfQ61164 Gm22974-201ENSMUST00000083301 103 ntBASIC3.18□□□□□ -1.9
CtcfQ61164 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
CtcfQ61164 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CtcfQ61164 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CtcfQ61164 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CtcfQ61164 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm22831-201ENSMUST00000102473 109 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm9009-201ENSMUST00000117321 326 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm14823-201ENSMUST00000117698 238 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm2066-201ENSMUST00000118046 389 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm25325-201ENSMUST00000122559 86 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm25184-201ENSMUST00000157753 163 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Gm16111-201ENSMUST00000162128 285 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CtcfQ61164 Gm5967-201ENSMUST00000172723 494 ntBASIC3.17□□□□□ -1.9
CtcfQ61164 Mir5099-201ENSMUST00000175257 74 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms