Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Usf1Q61069 Gm26154-201ENSMUST00000102339 96 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm12697-201ENSMUST00000118008 667 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm15077-201ENSMUST00000122344 362 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm15878-201ENSMUST00000127561 306 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Trav20-201ENSMUST00000142754 347 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm24010-201ENSMUST00000157731 282 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm25836-201ENSMUST00000158918 123 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Usf1Q61069 Gm38333-201ENSMUST00000193608 604 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm44011-201ENSMUST00000203336 394 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm45654-201ENSMUST00000210980 123 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.05□□□□□ -2.08
Usf1Q61069 Gm19118-201ENSMUST00000222554 98 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Usf1Q61069 Gm10298-201ENSMUST00000074801 265 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm22806-201ENSMUST00000082738 136 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Usf1Q61069 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.05□□□□□ -2.08
Usf1Q61069 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.05□□□□□ -2.08
Usf1Q61069 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.05□□□□□ -2.08
Usf1Q61069 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usf1Q61069 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Usf1Q61069 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm12393-201ENSMUST00000117084 848 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm15183-201ENSMUST00000118933 348 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm13913-201ENSMUST00000121126 260 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm14402-201ENSMUST00000122217 508 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm23980-201ENSMUST00000157135 158 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm25910-201ENSMUST00000157620 140 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm22382-201ENSMUST00000158185 130 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm24056-201ENSMUST00000158617 146 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm23476-201ENSMUST00000158881 274 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usf1Q61069 Mir496b-201ENSMUST00000184935 113 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28825-201ENSMUST00000186233 238 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28838-201ENSMUST00000186338 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm29635-201ENSMUST00000187221 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm29026-201ENSMUST00000187787 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28797-201ENSMUST00000188543 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28855-201ENSMUST00000188680 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28705-201ENSMUST00000189548 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28939-201ENSMUST00000190351 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28223-201ENSMUST00000190469 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm29092-201ENSMUST00000190768 315 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.04□□□□□ -2.08
Usf1Q61069 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm44459-201ENSMUST00000203926 160 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm44923-201ENSMUST00000206673 85 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm45296-201ENSMUST00000209625 205 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm45240-201ENSMUST00000211437 674 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm8940-201ENSMUST00000212585 219 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usf1Q61069 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usf1Q61069 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Usf1Q61069 Gm22443-201ENSMUST00000082890 107 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Gm24045-201ENSMUST00000083113 98 ntBASIC2.04□□□□□ -2.08
Usf1Q61069 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Usf1Q61069 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usf1Q61069 Gm25421-201ENSMUST00000104218 164 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm11460-201ENSMUST00000118200 361 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm13804-201ENSMUST00000119552 172 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm12006-201ENSMUST00000120786 403 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm2830-201ENSMUST00000140330 385 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm20543-201ENSMUST00000174200 726 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm25243-201ENSMUST00000174912 207 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm22851-201ENSMUST00000178741 94 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm25074-201ENSMUST00000178782 94 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usf1Q61069 Gm28169-201ENSMUST00000190342 345 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Usf1Q61069 Gm7692-201ENSMUST00000213534 409 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm7065-201ENSMUST00000222150 474 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm26327-201ENSMUST00000093724 111 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Usf1Q61069 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.03□□□□□ -2.08
Usf1Q61069 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Usf1Q61069 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Usf1Q61069 Mir758-201ENSMUST00000103260 81 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Mir1192-201ENSMUST00000116976 121 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usf1Q61069 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Gm15914-201ENSMUST00000161922 309 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.02□□□□□ -2.09
Usf1Q61069 Mir6370-201ENSMUST00000183510 120 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms