Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm22779-201ENSMUST00000104085 107 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm15861-201ENSMUST00000120979 339 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm15309-201ENSMUST00000121644 240 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm26049-201ENSMUST00000157313 108 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Mir3104-201ENSMUST00000174911 63 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm28282-201ENSMUST00000186072 186 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm38238-201ENSMUST00000194334 346 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm38154-201ENSMUST00000195444 340 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Mir5121-201ENSMUST00000198528 74 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm42578-201ENSMUST00000199960 194 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm13581-201ENSMUST00000120675 278 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm22452-201ENSMUST00000122804 104 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm17052-201ENSMUST00000165496 289 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm9402-201ENSMUST00000196849 388 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm26922-201ENSMUST00000082687 72 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm26265-201ENSMUST00000083277 135 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm25128-201ENSMUST00000083339 76 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Mir128-1-201ENSMUST00000083586 70 ntBASIC0.6□□□□□ -2.31
Trav3-1Q5R1I8 Gm13439-201ENSMUST00000117541 409 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm13356-201ENSMUST00000121678 335 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm24854-201ENSMUST00000158025 98 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm25243-201ENSMUST00000174912 207 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Mir28b-201ENSMUST00000175399 80 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Mir6388-201ENSMUST00000184417 75 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm37989-201ENSMUST00000195202 803 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm18039-201ENSMUST00000217816 728 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm22061-201ENSMUST00000082557 107 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm25257-201ENSMUST00000083907 110 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Gm16261-201ENSMUST00000096813 205 ntBASIC0.59□□□□□ -2.31
Trav3-1Q5R1I8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm24982-201ENSMUST00000104456 132 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm22678-201ENSMUST00000116974 101 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm12755-201ENSMUST00000122297 282 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm26348-201ENSMUST00000157528 240 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm24417-201ENSMUST00000178123 79 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm24653-201ENSMUST00000178541 79 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm25934-201ENSMUST00000178642 79 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm37098-201ENSMUST00000192290 244 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm43405-201ENSMUST00000198642 337 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm45013-201ENSMUST00000206883 178 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 CT030705.1-201ENSMUST00000223971 533 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm26328-201ENSMUST00000082821 107 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Gm25794-201ENSMUST00000083286 107 ntBASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Trav3-1Q5R1I8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm23551-201ENSMUST00000116852 121 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm14594-201ENSMUST00000118052 537 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm14590-201ENSMUST00000118934 537 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm25115-201ENSMUST00000157187 140 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm22233-201ENSMUST00000157464 114 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm25868-201ENSMUST00000158253 114 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm24002-201ENSMUST00000158456 104 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm24221-201ENSMUST00000158833 313 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm6660-201ENSMUST00000179149 468 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm14596-201ENSMUST00000180268 537 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm14595-201ENSMUST00000180335 537 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm28995-201ENSMUST00000186625 261 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm29005-201ENSMUST00000186773 320 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm44300-201ENSMUST00000196792 121 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 CT009696.2-201ENSMUST00000216668 432 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 n-R5s166-201ENSMUST00000082898 121 ntBASIC0.57□□□□□ -2.32
Trav3-1Q5R1I8 Gm23202-201ENSMUST00000104376 129 ntBASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav3-1Q5R1I8 Gm22194-201ENSMUST00000116869 95 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms