Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm12825-201ENSMUST00000120249 563 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm25334-201ENSMUST00000158036 110 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm44825-201ENSMUST00000207557 150 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm44598-201ENSMUST00000207566 150 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Platr25-208ENSMUST00000222602 939 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm24805-201ENSMUST00000082931 104 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm23100-201ENSMUST00000083455 141 ntBASIC1.09□□□□□ -2.23
Trav8d-1Q5R1H8 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.09□□□□□ -2.24
Trav8d-1Q5R1H8 Mir223-201ENSMUST00000102112 110 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22779-201ENSMUST00000104085 107 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm12512-201ENSMUST00000119620 217 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm12309-201ENSMUST00000119889 182 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm5396-201ENSMUST00000121222 532 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm26049-201ENSMUST00000157313 108 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25888-201ENSMUST00000157778 302 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Mir6399-201ENSMUST00000184050 84 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm29460-201ENSMUST00000188607 714 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Trdv3-201ENSMUST00000198551 309 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav8d-1Q5R1H8 Gm11219-201ENSMUST00000118565 358 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm13603-201ENSMUST00000119404 83 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22217-201ENSMUST00000157556 313 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm7953-201ENSMUST00000168278 469 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm29231-201ENSMUST00000179850 319 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm27493-201ENSMUST00000184128 78 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm27964-201ENSMUST00000185195 62 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28838-201ENSMUST00000186338 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm29635-201ENSMUST00000187221 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm29026-201ENSMUST00000187787 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28797-201ENSMUST00000188543 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28855-201ENSMUST00000188680 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28705-201ENSMUST00000189548 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28939-201ENSMUST00000190351 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28223-201ENSMUST00000190469 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm29092-201ENSMUST00000190768 315 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm44320-201ENSMUST00000199276 86 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22974-201ENSMUST00000083301 103 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm24254-201ENSMUST00000083702 104 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25257-201ENSMUST00000083907 110 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
Trav8d-1Q5R1H8 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm26080-201ENSMUST00000104069 131 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22091-201ENSMUST00000116908 127 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm17061-201ENSMUST00000163167 499 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22716-201ENSMUST00000177596 107 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25730-201ENSMUST00000178753 165 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28196-201ENSMUST00000187719 640 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm28151-201ENSMUST00000189404 951 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm19123-201ENSMUST00000190716 651 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm37029-201ENSMUST00000195773 239 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm45730-201ENSMUST00000212560 395 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25636-201ENSMUST00000082666 133 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.06□□□□□ -2.24
Trav8d-1Q5R1H8 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.05□□□□□ -2.24
Trav8d-1Q5R1H8 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.05□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25213-201ENSMUST00000102388 113 ntBASIC1.05□□□□□ -2.24
Trav8d-1Q5R1H8 Gm22496-201ENSMUST00000104493 88 ntBASIC1.05□□□□□ -2.24
Trav8d-1Q5R1H8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms