Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm23221-201ENSMUST00000158118 93 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm17113-201ENSMUST00000170118 171 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm6660-201ENSMUST00000179149 468 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm27493-201ENSMUST00000184128 78 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm29460-201ENSMUST00000188607 714 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm37029-201ENSMUST00000195773 239 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm17991-201ENSMUST00000208139 297 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav5d-4Q5R1F6 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Mir301b-201ENSMUST00000102333 97 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm23011-201ENSMUST00000104148 132 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25958-201ENSMUST00000175114 71 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Mir3569-201ENSMUST00000185080 58 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm29950-201ENSMUST00000195273 237 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm42647-201ENSMUST00000195939 459 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm23100-201ENSMUST00000083455 141 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm24254-201ENSMUST00000083702 104 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm23104-201ENSMUST00000083722 104 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.21□□□□□ -2.22
Trav5d-4Q5R1F6 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14882-201ENSMUST00000117216 218 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11845-201ENSMUST00000117886 327 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11219-201ENSMUST00000118565 358 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm23754-201ENSMUST00000157576 63 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm22556-201ENSMUST00000157803 100 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25334-201ENSMUST00000158036 110 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm24076-201ENSMUST00000158179 94 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm2966-201ENSMUST00000166052 481 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm28404-201ENSMUST00000190242 453 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm38041-201ENSMUST00000194445 661 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm43427-201ENSMUST00000198188 331 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm44961-201ENSMUST00000207450 196 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm7984-201ENSMUST00000060640 538 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr575-201ENSMUST00000084812 957 ntBASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav5d-4Q5R1F6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm23122-201ENSMUST00000157645 103 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25333-201ENSMUST00000158035 246 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm24348-201ENSMUST00000158710 130 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25831-201ENSMUST00000158924 163 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Mir6341-201ENSMUST00000183490 121 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm38154-201ENSMUST00000195444 340 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm45912-201ENSMUST00000210646 543 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm45240-201ENSMUST00000211437 674 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm19709-201ENSMUST00000215403 482 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm16976-205ENSMUST00000227324 226 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm26166-201ENSMUST00000083788 107 ntBASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14879-201ENSMUST00000117308 507 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm14823-201ENSMUST00000117698 238 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm15279-201ENSMUST00000155593 288 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm26414-201ENSMUST00000157674 269 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm27245-201ENSMUST00000184385 376 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Gm37162-201ENSMUST00000191708 551 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Trdv3-201ENSMUST00000198551 309 ntBASIC1.18□□□□□ -2.22
Trav5d-4Q5R1F6 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms