Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm22765-201ENSMUST00000158371 128 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm22740-201ENSMUST00000083439 109 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Gm22578-201ENSMUST00000083730 107 ntBASIC1.45□□□□□ -2.18
Col27a1Q5QNQ9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm3221-201ENSMUST00000164869 440 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm24713-201ENSMUST00000178850 107 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm25448-201ENSMUST00000180065 107 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm28438-201ENSMUST00000188299 345 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm45590-201ENSMUST00000209715 262 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm29809-201ENSMUST00000218423 493 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm22247-201ENSMUST00000082476 131 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm23645-201ENSMUST00000083228 108 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Gm25755-201ENSMUST00000083396 107 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Mir10b-201ENSMUST00000083566 68 ntBASIC1.44□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm24911-201ENSMUST00000157292 136 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20794-201ENSMUST00000177626 628 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm25873-201ENSMUST00000180317 107 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm28356-202ENSMUST00000187566 858 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20885-201ENSMUST00000190192 654 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm33571-201ENSMUST00000193271 657 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm36866-201ENSMUST00000193343 657 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm36047-201ENSMUST00000193659 657 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20857-201ENSMUST00000194766 657 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm20858-201ENSMUST00000195459 657 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm30638-201ENSMUST00000195570 656 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm43402-201ENSMUST00000197159 159 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm44125-201ENSMUST00000203068 448 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Mir137-201ENSMUST00000083635 73 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm14931-201ENSMUST00000111079 253 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm13806-201ENSMUST00000117822 325 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm15113-201ENSMUST00000119280 836 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm11556-201ENSMUST00000120751 288 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm25557-201ENSMUST00000158084 315 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Mir3066-201ENSMUST00000175296 83 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm23568-201ENSMUST00000177960 92 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm24829-201ENSMUST00000179245 92 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm23648-201ENSMUST00000180301 107 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm38149-201ENSMUST00000191943 339 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm43171-201ENSMUST00000199882 291 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm19118-201ENSMUST00000222554 98 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm24921-201ENSMUST00000083024 107 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm23506-201ENSMUST00000083077 107 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Gm23741-201ENSMUST00000097237 171 ntBASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col27a1Q5QNQ9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm15211-201ENSMUST00000118932 528 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm22236-201ENSMUST00000157093 106 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm22037-201ENSMUST00000157280 296 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm26348-201ENSMUST00000157528 240 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm28000-201ENSMUST00000184380 85 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col27a1Q5QNQ9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms