Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
Clhc1Q5M6W3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Clhc1Q5M6W3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Clhc1Q5M6W3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm14013-201ENSMUST00000119006 270 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm13368-201ENSMUST00000122443 430 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm24517-201ENSMUST00000122560 107 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm22633-201ENSMUST00000179834 107 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm28399-201ENSMUST00000186221 318 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm28572-201ENSMUST00000187444 318 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm10193-201ENSMUST00000188288 231 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm44449-201ENSMUST00000203610 153 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm44938-201ENSMUST00000208614 427 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm25402-201ENSMUST00000082966 131 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.05□□□□□ -2.08
Clhc1Q5M6W3 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm24984-201ENSMUST00000104454 133 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm14848-201ENSMUST00000121850 467 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm23586-201ENSMUST00000157657 123 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm22076-201ENSMUST00000158601 84 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm9593-201ENSMUST00000166034 469 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm43865-201ENSMUST00000204721 127 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm9377-201ENSMUST00000207227 623 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.04□□□□□ -2.08
Clhc1Q5M6W3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm23202-201ENSMUST00000104376 129 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm22674-201ENSMUST00000104413 131 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Mdga2-203ENSMUST00000113942 423 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm14765-201ENSMUST00000121954 326 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm14530-201ENSMUST00000122391 333 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm23429-201ENSMUST00000122486 149 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm23381-201ENSMUST00000157676 94 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm27396-201ENSMUST00000157708 58 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm24168-201ENSMUST00000178825 107 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm23862-201ENSMUST00000180342 94 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm25788-201ENSMUST00000082721 131 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Gm24045-201ENSMUST00000083113 98 ntBASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Clhc1Q5M6W3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Mir190b-201ENSMUST00000104803 80 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm14551-201ENSMUST00000120802 256 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm15281-201ENSMUST00000125181 351 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm23981-201ENSMUST00000157136 106 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm25658-201ENSMUST00000158472 128 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm28745-201ENSMUST00000190069 305 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm45730-201ENSMUST00000212560 395 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Mir301-201ENSMUST00000083655 86 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.02□□□□□ -2.09
Clhc1Q5M6W3 Gm22591-201ENSMUST00000104243 106 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm24907-201ENSMUST00000116932 128 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm14887-201ENSMUST00000119522 663 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm24053-201ENSMUST00000158620 105 ntBASIC2.01□□□□□ -2.09
Clhc1Q5M6W3 Gm24837-201ENSMUST00000158683 81 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms