Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm25090-201ENSMUST00000104000 132 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm24068-201ENSMUST00000104513 132 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm15896-201ENSMUST00000118045 440 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm14638-201ENSMUST00000121338 216 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm23956-201ENSMUST00000157211 119 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm25163-201ENSMUST00000158905 104 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm20794-201ENSMUST00000177626 628 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm21744-201ENSMUST00000178403 662 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm22131-201ENSMUST00000178415 94 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm8532-201ENSMUST00000179174 461 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm21171-201ENSMUST00000180048 673 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm29413-201ENSMUST00000186019 880 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm29429-201ENSMUST00000187071 121 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm28700-201ENSMUST00000187614 579 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm29639-201ENSMUST00000188375 580 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm28843-201ENSMUST00000189198 678 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm29546-201ENSMUST00000191171 678 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm43284-201ENSMUST00000200103 253 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm45288-201ENSMUST00000210236 151 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.14□□□□□ -2.07
Usp28Q5I043 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.14□□□□□ -2.07
Usp28Q5I043 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.14□□□□□ -2.07
Usp28Q5I043 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm35558-203ENSMUST00000222264 204 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.14□□□□□ -2.07
Usp28Q5I043 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm25124-201ENSMUST00000083345 164 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.14□□□□□ -2.07
Usp28Q5I043 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm24889-201ENSMUST00000104388 132 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm24984-201ENSMUST00000104454 133 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm14293-201ENSMUST00000118528 577 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm25339-201ENSMUST00000157458 232 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm24770-201ENSMUST00000158505 92 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm8114-201ENSMUST00000172225 484 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm22192-201ENSMUST00000175128 85 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm27957-201ENSMUST00000184054 127 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm28151-201ENSMUST00000189404 951 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm43600-201ENSMUST00000202134 223 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.13□□□□□ -2.07
Usp28Q5I043 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Usp28Q5I043 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm25632-201ENSMUST00000083112 85 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Usp28Q5I043 Gm15846-201ENSMUST00000116022 320 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm11845-201ENSMUST00000117886 327 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm24839-201ENSMUST00000122602 107 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm16218-201ENSMUST00000155424 388 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm22793-201ENSMUST00000157227 330 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm26414-201ENSMUST00000157674 269 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm22841-201ENSMUST00000158443 62 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm20656-201ENSMUST00000176925 518 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm24656-201ENSMUST00000177548 132 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm18964-201ENSMUST00000193013 563 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm37550-201ENSMUST00000193230 463 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm37119-201ENSMUST00000195691 389 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm43402-201ENSMUST00000197159 159 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm44142-201ENSMUST00000203358 311 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.12□□□□□ -2.07
Usp28Q5I043 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm22154-201ENSMUST00000083844 131 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm381-201ENSMUST00000117443 2037 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.12□□□□□ -2.07
Usp28Q5I043 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm25321-201ENSMUST00000122558 102 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm23022-201ENSMUST00000158768 180 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm24168-201ENSMUST00000178825 107 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm5224-201ENSMUST00000183060 350 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm9022-202ENSMUST00000183285 483 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm28343-201ENSMUST00000185386 112 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.11□□□□□ -2.07
Usp28Q5I043 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm28951-201ENSMUST00000190742 313 ntBASIC2.11□□□□□ -2.07
Usp28Q5I043 Gm37377-201ENSMUST00000191733 304 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms