Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm37119-201ENSMUST00000195691 389 ntBASIC1.86□□□□□ -2.11
Shank3Q4ACU6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Gm44449-201ENSMUST00000203610 153 ntBASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Gm45048-201ENSMUST00000207058 429 ntBASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.86□□□□□ -2.11
Shank3Q4ACU6 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Shank3Q4ACU6 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm8217-201ENSMUST00000119136 465 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm14815-201ENSMUST00000120060 488 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm12825-201ENSMUST00000120249 563 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm11556-201ENSMUST00000120751 288 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm22765-201ENSMUST00000158371 128 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm24770-201ENSMUST00000158505 92 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm17085-201ENSMUST00000165425 502 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm24086-201ENSMUST00000175171 98 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm24100-201ENSMUST00000178592 79 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm28755-201ENSMUST00000185773 199 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm37568-201ENSMUST00000191755 364 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm44520-201ENSMUST00000205447 802 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm25411-201ENSMUST00000083760 151 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.85□□□□□ -2.11
Shank3Q4ACU6 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Mir582-201ENSMUST00000103758 81 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm13085-201ENSMUST00000118356 171 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm24910-201ENSMUST00000157289 272 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm24198-201ENSMUST00000157812 108 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm8041-201ENSMUST00000199755 616 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm19540-201ENSMUST00000221843 810 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.84□□□□□ -2.11
Shank3Q4ACU6 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Shank3Q4ACU6 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.84□□□□□ -2.12
Shank3Q4ACU6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.84□□□□□ -2.12
Shank3Q4ACU6 Gm25088-201ENSMUST00000101803 79 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm14657-201ENSMUST00000117461 302 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm7164-201ENSMUST00000117503 450 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm11819-201ENSMUST00000122192 372 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm12238-201ENSMUST00000127764 124 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm13901-201ENSMUST00000137252 468 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm26278-201ENSMUST00000157098 132 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm25637-201ENSMUST00000157529 107 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm22340-201ENSMUST00000157717 114 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm24959-201ENSMUST00000157924 146 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm3104-201ENSMUST00000171004 473 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Mir6371-201ENSMUST00000184470 111 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm28058-201ENSMUST00000186421 264 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm29640-201ENSMUST00000187972 278 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm36966-201ENSMUST00000192217 413 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm24430-201ENSMUST00000104077 104 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm14918-201ENSMUST00000118153 268 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm11384-201ENSMUST00000121376 303 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm24517-201ENSMUST00000122560 107 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm26049-201ENSMUST00000157313 108 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm23619-201ENSMUST00000178411 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm25474-201ENSMUST00000179052 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm22047-201ENSMUST00000179176 94 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm28779-201ENSMUST00000189678 323 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm44657-201ENSMUST00000208568 450 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm46994-201ENSMUST00000221523 219 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 Gm5955-201ENSMUST00000222712 219 ntBASIC1.83□□□□□ -2.12
Shank3Q4ACU6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 240.1 ms