Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm5374-201ENSMUST00000222868 657 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm25475-201ENSMUST00000082825 180 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm26166-201ENSMUST00000083788 107 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm3867-201ENSMUST00000086108 279 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm26154-201ENSMUST00000102339 96 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm13355-201ENSMUST00000117996 317 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm12872-201ENSMUST00000121835 320 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm14848-201ENSMUST00000121850 467 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm14564-201ENSMUST00000122159 294 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm25321-201ENSMUST00000122558 102 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm27588-201ENSMUST00000185096 263 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm23370-202ENSMUST00000197008 129 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm44519-201ENSMUST00000206486 122 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm44870-201ENSMUST00000207291 357 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm20102-201ENSMUST00000222445 220 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm9370-201ENSMUST00000222787 609 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trim40Q3UWA4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.35□□□□□ -2.03
Trim40Q3UWA4 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm23184-201ENSMUST00000122594 131 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm22947-201ENSMUST00000158559 91 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm23196-201ENSMUST00000158806 107 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm26430-201ENSMUST00000178054 107 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm27220-201ENSMUST00000183453 262 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm6059-201ENSMUST00000196903 340 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm24350-202ENSMUST00000198309 132 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm23517-201ENSMUST00000082830 192 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm25698-201ENSMUST00000082897 107 ntBASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trim40Q3UWA4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.34□□□□□ -2.04
Trim40Q3UWA4 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trim40Q3UWA4 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm22023-201ENSMUST00000104354 130 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm25539-201ENSMUST00000116886 122 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm25280-201ENSMUST00000157269 101 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm24291-201ENSMUST00000157633 162 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm24997-201ENSMUST00000157910 105 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm17148-201ENSMUST00000164702 249 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm27624-201ENSMUST00000185047 177 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm29352-201ENSMUST00000188054 544 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Trbv6-201ENSMUST00000193743 276 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm43083-201ENSMUST00000199594 476 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm8031-201ENSMUST00000213430 626 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm19118-201ENSMUST00000222554 98 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm30155-201ENSMUST00000223458 339 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm23615-201ENSMUST00000082602 65 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm23247-201ENSMUST00000083373 107 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Snord14d-201ENSMUST00000083424 86 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.33□□□□□ -2.04
Trim40Q3UWA4 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm12765-201ENSMUST00000117273 615 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm13880-201ENSMUST00000118421 474 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm15029-201ENSMUST00000119742 199 ntBASIC2.32□□□□□ -2.04
Trim40Q3UWA4 Gm13153-201ENSMUST00000120969 637 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms