Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm27028-201ENSMUST00000182303 399 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm28648-201ENSMUST00000190092 343 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm24948-201ENSMUST00000082866 207 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm25421-201ENSMUST00000104218 164 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm14887-201ENSMUST00000119522 663 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm14049-201ENSMUST00000121009 636 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 AA413626-201ENSMUST00000121125 494 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm9225-201ENSMUST00000121921 836 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Mir7016-201ENSMUST00000184308 72 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm29604-201ENSMUST00000187176 163 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm37641-201ENSMUST00000193837 239 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm45071-201ENSMUST00000205353 571 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm22866-201ENSMUST00000083947 177 ntBASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Upf3aQ3ULJ3 Gm25938-201ENSMUST00000104139 166 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm15844-201ENSMUST00000118016 576 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm11358-201ENSMUST00000122310 373 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm25220-201ENSMUST00000157546 95 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm22611-201ENSMUST00000158288 150 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm23342-201ENSMUST00000158958 115 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Mir5101-201ENSMUST00000175181 83 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm29216-201ENSMUST00000187117 492 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm43955-201ENSMUST00000204332 142 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm7214-201ENSMUST00000222428 272 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Upf3aQ3ULJ3 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm14765-201ENSMUST00000121954 326 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm27245-201ENSMUST00000184385 376 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm43402-201ENSMUST00000197159 159 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm44408-201ENSMUST00000200205 66 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm29848-201ENSMUST00000203107 295 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm44472-201ENSMUST00000204922 943 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.11□□□□□ -2.07
Upf3aQ3ULJ3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm22496-201ENSMUST00000104493 88 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm13876-201ENSMUST00000118451 261 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm15497-201ENSMUST00000119137 551 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm23212-201ENSMUST00000122718 60 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm25624-201ENSMUST00000157222 275 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm26024-201ENSMUST00000158657 322 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm25175-201ENSMUST00000178712 79 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm11395-201ENSMUST00000181011 499 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm27898-201ENSMUST00000183987 80 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Mir496b-201ENSMUST00000184935 113 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm29657-201ENSMUST00000189807 342 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm37557-201ENSMUST00000191640 139 ntBASIC2.1□□□□□ -2.07
Upf3aQ3ULJ3 Gm37029-201ENSMUST00000195773 239 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms