Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm23084-201ENSMUST00000157850 114 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm25863-201ENSMUST00000158249 329 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm17052-201ENSMUST00000165496 289 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm43155-201ENSMUST00000202661 494 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm44294-201ENSMUST00000205090 728 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm6240-201ENSMUST00000208014 473 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm22247-201ENSMUST00000082476 131 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Snord21-201ENSMUST00000082519 94 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Limch1Q3UH68 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm25764-201ENSMUST00000104092 134 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm25765-201ENSMUST00000104100 132 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm13355-201ENSMUST00000117996 317 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm12071-201ENSMUST00000121968 469 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm23585-201ENSMUST00000157656 102 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm26187-201ENSMUST00000157693 101 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm23865-201ENSMUST00000157723 97 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm23641-201ENSMUST00000157857 101 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm37097-201ENSMUST00000193676 336 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm45317-201ENSMUST00000210385 223 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm45420-201ENSMUST00000211243 425 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm24626-201ENSMUST00000082621 161 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Limch1Q3UH68 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Limch1Q3UH68 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.42□□□□□ -1.7
Limch1Q3UH68 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm15896-201ENSMUST00000118045 440 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm11982-201ENSMUST00000121480 314 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm11819-201ENSMUST00000122192 372 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm22107-201ENSMUST00000122548 100 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm22988-201ENSMUST00000122759 144 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm25436-201ENSMUST00000158275 145 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm5967-201ENSMUST00000172723 494 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm24167-201ENSMUST00000177733 124 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm24028-201ENSMUST00000178991 124 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm37361-201ENSMUST00000194345 132 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Mir376a-201ENSMUST00000197584 68 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm44657-201ENSMUST00000208568 450 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Limch1Q3UH68 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm7065-201ENSMUST00000222150 474 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm23736-201ENSMUST00000082553 75 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm26204-201ENSMUST00000082906 107 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.41□□□□□ -1.7
Limch1Q3UH68 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Limch1Q3UH68 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Limch1Q3UH68 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Limch1Q3UH68 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Limch1Q3UH68 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.4□□□□□ -1.7
Limch1Q3UH68 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Limch1Q3UH68 Gm25915-201ENSMUST00000104265 126 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm24987-201ENSMUST00000104453 134 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm12982-201ENSMUST00000117408 190 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm13687-201ENSMUST00000119857 282 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm23982-201ENSMUST00000157141 106 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm29022-201ENSMUST00000190702 225 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm30341-201ENSMUST00000194363 289 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm44887-201ENSMUST00000208980 178 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.4□□□□□ -1.71
Limch1Q3UH68 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm24152-201ENSMUST00000082764 163 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm24948-201ENSMUST00000082866 207 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Gm22294-201ENSMUST00000083308 104 ntBASIC4.4□□□□□ -1.71
Limch1Q3UH68 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Limch1Q3UH68 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Limch1Q3UH68 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Limch1Q3UH68 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Limch1Q3UH68 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Limch1Q3UH68 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Limch1Q3UH68 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm24282-201ENSMUST00000104232 66 ntBASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm25391-201ENSMUST00000157342 134 ntBASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm23540-201ENSMUST00000157543 164 ntBASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm24314-201ENSMUST00000158274 123 ntBASIC4.39□□□□□ -1.71
Limch1Q3UH68 Gm25015-201ENSMUST00000158400 128 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms