Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm22752-201ENSMUST00000102083 109 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm13880-201ENSMUST00000118421 474 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm14013-201ENSMUST00000119006 270 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm12876-201ENSMUST00000120975 408 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm26275-201ENSMUST00000157101 268 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm24546-201ENSMUST00000158652 102 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm25243-201ENSMUST00000174912 207 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm26335-201ENSMUST00000178449 107 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm28647-201ENSMUST00000188416 197 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm6060-201ENSMUST00000188671 251 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm28744-201ENSMUST00000189939 340 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm28211-201ENSMUST00000190920 315 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Gm5001-201ENSMUST00000204361 331 ntBASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trafd1Q3UDK1 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm12779-201ENSMUST00000121496 143 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm44726-201ENSMUST00000203427 217 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm45013-201ENSMUST00000206883 178 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm18854-201ENSMUST00000211196 329 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm23515-201ENSMUST00000082829 107 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm25199-201ENSMUST00000083095 104 ntBASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trafd1Q3UDK1 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm12386-201ENSMUST00000117380 688 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm14843-201ENSMUST00000119596 212 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm22227-201ENSMUST00000157356 259 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm8580-201ENSMUST00000160295 464 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm15914-201ENSMUST00000161922 309 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm24086-201ENSMUST00000175171 98 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Mir3075-201ENSMUST00000175340 85 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm8532-201ENSMUST00000179174 461 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm27385-201ENSMUST00000184747 104 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm27369-201ENSMUST00000185182 71 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm43367-201ENSMUST00000199986 625 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm44844-201ENSMUST00000207242 336 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm5374-201ENSMUST00000222868 657 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Gm24698-201ENSMUST00000083883 130 ntBASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Trafd1Q3UDK1 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm22834-201ENSMUST00000102021 79 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm25485-201ENSMUST00000104120 132 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm23956-201ENSMUST00000157211 119 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm25910-201ENSMUST00000157620 140 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm22666-201ENSMUST00000158717 164 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm18588-201ENSMUST00000177308 492 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm27470-201ENSMUST00000184070 210 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm29134-201ENSMUST00000186579 126 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm28414-201ENSMUST00000190111 294 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm28337-201ENSMUST00000190425 666 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm36866-201ENSMUST00000193343 657 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm36047-201ENSMUST00000193659 657 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm20857-201ENSMUST00000194766 657 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm20858-201ENSMUST00000195459 657 ntBASIC2.28□□□□□ -2.04
Trafd1Q3UDK1 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms