Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm13717-201ENSMUST00000119868 365 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm12858-201ENSMUST00000121913 208 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm24839-201ENSMUST00000122602 107 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm25280-201ENSMUST00000157269 101 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm22435-201ENSMUST00000158552 128 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Gm28995-201ENSMUST00000186625 261 ntBASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ddb1Q3U1J4 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm25153-201ENSMUST00000157118 156 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm26414-201ENSMUST00000157674 269 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm4468-201ENSMUST00000170206 294 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Mir3076-201ENSMUST00000175415 60 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm26501-201ENSMUST00000178307 107 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm34314-201ENSMUST00000203622 367 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm19244-201ENSMUST00000204340 253 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm45452-201ENSMUST00000210905 177 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm26164-201ENSMUST00000083793 104 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm25937-201ENSMUST00000083912 107 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.87□□□□□ -1.79
Ddb1Q3U1J4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24596-201ENSMUST00000122504 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm6956-201ENSMUST00000134724 546 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23137-201ENSMUST00000157559 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23752-201ENSMUST00000157584 115 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24584-201ENSMUST00000157972 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25211-201ENSMUST00000177553 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24540-201ENSMUST00000177627 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25256-201ENSMUST00000177746 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26426-201ENSMUST00000177866 123 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22822-201ENSMUST00000177941 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Rnu6-201ENSMUST00000178023 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23151-201ENSMUST00000178061 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25245-201ENSMUST00000178139 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24753-201ENSMUST00000178183 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25829-201ENSMUST00000178275 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22092-201ENSMUST00000178290 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24486-201ENSMUST00000178420 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23217-201ENSMUST00000178482 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26245-201ENSMUST00000178491 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23610-201ENSMUST00000178659 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23092-201ENSMUST00000178688 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25709-201ENSMUST00000178844 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25547-201ENSMUST00000178877 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25312-201ENSMUST00000178972 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24722-201ENSMUST00000179017 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22969-201ENSMUST00000179018 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25101-201ENSMUST00000179057 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26378-201ENSMUST00000179093 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24873-201ENSMUST00000179101 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23934-201ENSMUST00000179111 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22623-201ENSMUST00000179244 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25737-201ENSMUST00000179274 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22618-201ENSMUST00000179376 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24182-201ENSMUST00000179419 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24242-201ENSMUST00000179440 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24863-201ENSMUST00000179499 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25064-201ENSMUST00000179535 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26295-201ENSMUST00000179690 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23712-201ENSMUST00000179713 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22823-201ENSMUST00000179754 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22360-201ENSMUST00000179775 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24978-201ENSMUST00000179782 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24967-201ENSMUST00000179791 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25173-201ENSMUST00000179794 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24870-201ENSMUST00000179897 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22288-201ENSMUST00000179904 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22645-201ENSMUST00000180010 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26060-201ENSMUST00000180094 123 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm24565-201ENSMUST00000180099 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23805-201ENSMUST00000180129 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm23512-201ENSMUST00000180237 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25327-201ENSMUST00000180263 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm25528-201ENSMUST00000180264 132 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm26058-201ENSMUST00000180294 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm22418-201ENSMUST00000180326 107 ntBASIC3.86□□□□□ -1.79
Ddb1Q3U1J4 Gm18486-201ENSMUST00000184040 298 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 270.9 ms