Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 LOC667541-201ENSMUST00000223408 278 ntBASIC3.44□□□□□ -1.86
Usp39Q3TIX9 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.44□□□□□ -1.86
Usp39Q3TIX9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.44□□□□□ -1.86
Usp39Q3TIX9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Usp39Q3TIX9 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Usp39Q3TIX9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Usp39Q3TIX9 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm650-201ENSMUST00000144428 1551 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Mir541-201ENSMUST00000102097 90 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm23175-201ENSMUST00000104371 132 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm12125-201ENSMUST00000117261 736 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm14971-201ENSMUST00000117980 663 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm6574-201ENSMUST00000120037 362 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm24481-201ENSMUST00000157210 102 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm25654-201ENSMUST00000158467 88 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm23474-201ENSMUST00000158884 75 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm2962-201ENSMUST00000159266 336 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm21893-201ENSMUST00000179119 397 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm23860-201ENSMUST00000179446 132 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm23966-201ENSMUST00000179823 107 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm27189-201ENSMUST00000184119 190 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm27545-201ENSMUST00000184755 202 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm44960-201ENSMUST00000207403 141 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm45315-201ENSMUST00000209283 333 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm26121-201ENSMUST00000083364 162 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Mir10a-201ENSMUST00000083585 110 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 AF357428-201ENSMUST00000083815 69 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Gm23041-201ENSMUST00000083868 106 ntBASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Usp39Q3TIX9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm25915-201ENSMUST00000104265 126 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm25875-201ENSMUST00000104323 107 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm16032-201ENSMUST00000118534 168 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm12417-201ENSMUST00000119153 403 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm13273-201ENSMUST00000119737 159 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm15037-201ENSMUST00000120358 259 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm14846-201ENSMUST00000121868 216 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm14775-201ENSMUST00000122089 310 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm23168-201ENSMUST00000157156 143 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm23232-201ENSMUST00000157300 105 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm23234-201ENSMUST00000157304 134 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm22098-201ENSMUST00000157930 85 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm29657-201ENSMUST00000189807 342 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm9696-202ENSMUST00000191541 830 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm37575-201ENSMUST00000195467 309 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm43250-201ENSMUST00000196536 273 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm45420-201ENSMUST00000211243 425 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm5899-201ENSMUST00000071770 270 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm23650-201ENSMUST00000083355 70 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp39Q3TIX9 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.42□□□□□ -1.86
Usp39Q3TIX9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm22496-201ENSMUST00000104493 88 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm13714-201ENSMUST00000117313 221 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm15760-201ENSMUST00000119553 283 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm15244-201ENSMUST00000121122 130 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm25283-201ENSMUST00000157272 77 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm22380-201ENSMUST00000157479 95 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm25637-201ENSMUST00000157529 107 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm26045-201ENSMUST00000157862 97 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm25438-201ENSMUST00000158281 110 ntBASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.41□□□□□ -1.86
Usp39Q3TIX9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms