Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm25088-201ENSMUST00000101803 79 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm11935-201ENSMUST00000118608 399 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm24908-201ENSMUST00000157294 127 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm24478-201ENSMUST00000157439 158 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm24716-201ENSMUST00000157524 104 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Mir669n-201ENSMUST00000158636 54 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm17062-201ENSMUST00000166987 461 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm27991-201ENSMUST00000184804 137 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm28437-201ENSMUST00000190277 783 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm43007-201ENSMUST00000197618 291 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm44524-201ENSMUST00000203899 271 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm45150-201ENSMUST00000206051 467 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm45772-201ENSMUST00000212961 240 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm23503-201ENSMUST00000083903 107 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm5670-201ENSMUST00000093546 372 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
Hoxc4Q08624 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Hoxc4Q08624 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Hoxc4Q08624 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.91□□□□□ -2.1
Hoxc4Q08624 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm23109-201ENSMUST00000116867 126 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm12191-201ENSMUST00000118307 348 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm13876-201ENSMUST00000118451 261 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm9703-201ENSMUST00000119573 343 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm11891-201ENSMUST00000121241 619 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm23212-201ENSMUST00000122718 60 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm16355-201ENSMUST00000128606 231 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm23078-201ENSMUST00000157848 148 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm23813-201ENSMUST00000175153 77 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm28000-201ENSMUST00000184380 85 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Mir7026-201ENSMUST00000184384 67 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm27245-201ENSMUST00000184385 376 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm28283-201ENSMUST00000185509 178 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm29429-201ENSMUST00000187071 121 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm28925-201ENSMUST00000188586 168 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm37455-201ENSMUST00000191993 529 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm37029-201ENSMUST00000195773 239 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm44609-201ENSMUST00000207157 460 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Hoxc4Q08624 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm24150-201ENSMUST00000082759 104 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.9□□□□□ -2.11
Hoxc4Q08624 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm22779-201ENSMUST00000104085 107 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm23744-201ENSMUST00000104231 149 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm14894-201ENSMUST00000117170 270 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm14793-201ENSMUST00000118739 311 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm13720-201ENSMUST00000120741 196 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm24304-201ENSMUST00000177635 107 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm24713-201ENSMUST00000178850 107 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm25448-201ENSMUST00000180065 107 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Mir7667-201ENSMUST00000183866 63 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm37449-201ENSMUST00000193016 270 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm18658-201ENSMUST00000195558 270 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm37119-201ENSMUST00000195691 389 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm26922-201ENSMUST00000082687 72 ntBASIC1.89□□□□□ -2.11
Hoxc4Q08624 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hoxc4Q08624 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm26384-201ENSMUST00000102183 110 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm13439-201ENSMUST00000117541 409 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm8858-201ENSMUST00000118259 342 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm11352-201ENSMUST00000119264 517 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm14785-201ENSMUST00000120185 539 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm22483-201ENSMUST00000157986 274 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm24393-201ENSMUST00000158135 97 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm24878-201ENSMUST00000158782 104 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm24177-201ENSMUST00000158927 131 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm25156-201ENSMUST00000179809 79 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm37727-201ENSMUST00000191637 819 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm37579-201ENSMUST00000194291 142 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 Gm45791-201ENSMUST00000212908 352 ntBASIC1.88□□□□□ -2.11
Hoxc4Q08624 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms