Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm15493-201ENSMUST00000119461 528 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm42785-201ENSMUST00000202316 3835 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm18000-201ENSMUST00000212153 800 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm46233-201ENSMUST00000217831 449 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col9a1Q05722 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.67□□□□□ -1.66
Col9a1Q05722 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col9a1Q05722 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Snora64-201ENSMUST00000104521 134 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm14086-201ENSMUST00000117152 173 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm11460-201ENSMUST00000118200 361 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm14491-201ENSMUST00000121919 199 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm23666-201ENSMUST00000158053 116 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm10357-201ENSMUST00000159886 264 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm22510-201ENSMUST00000179304 79 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm26336-201ENSMUST00000179449 79 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm26390-201ENSMUST00000179628 79 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm18665-201ENSMUST00000189783 270 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.66□□□□□ -1.66
Col9a1Q05722 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Gm10298-201ENSMUST00000074801 265 ntBASIC4.66□□□□□ -1.66
Col9a1Q05722 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col9a1Q05722 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col9a1Q05722 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
Col9a1Q05722 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col9a1Q05722 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col9a1Q05722 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col9a1Q05722 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col9a1Q05722 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col9a1Q05722 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col9a1Q05722 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col9a1Q05722 Gm26421-201ENSMUST00000104279 132 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm26249-201ENSMUST00000116708 118 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm13560-201ENSMUST00000121865 329 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm12013-201ENSMUST00000121971 155 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm25544-201ENSMUST00000122676 120 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm26091-201ENSMUST00000122704 82 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm23667-201ENSMUST00000157466 120 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Mir1951-201ENSMUST00000157981 89 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.65□□□□□ -1.67
Col9a1Q05722 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.65□□□□□ -1.67
Col9a1Q05722 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.65□□□□□ -1.67
Col9a1Q05722 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col9a1Q05722 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col9a1Q05722 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col9a1Q05722 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col9a1Q05722 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col9a1Q05722 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col9a1Q05722 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col9a1Q05722 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col9a1Q05722 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col9a1Q05722 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col9a1Q05722 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col9a1Q05722 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm24068-201ENSMUST00000104513 132 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm12351-201ENSMUST00000118727 292 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm13155-201ENSMUST00000119277 646 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm8178-201ENSMUST00000121570 646 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm14649-201ENSMUST00000121814 324 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm26088-201ENSMUST00000157896 131 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm26405-201ENSMUST00000158495 100 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Mir3092-201ENSMUST00000174954 96 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm28992-201ENSMUST00000190534 139 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm44564-201ENSMUST00000207985 180 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 Gm24625-201ENSMUST00000082622 130 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 AF357428-201ENSMUST00000083815 69 ntBASIC4.64□□□□□ -1.67
Col9a1Q05722 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col9a1Q05722 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col9a1Q05722 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col9a1Q05722 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col9a1Q05722 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col9a1Q05722 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col9a1Q05722 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col9a1Q05722 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm25272-201ENSMUST00000104293 128 ntBASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm22514-201ENSMUST00000122547 308 ntBASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm26276-201ENSMUST00000157099 109 ntBASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm7592-201ENSMUST00000160674 627 ntBASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm27940-201ENSMUST00000184449 98 ntBASIC4.63□□□□□ -1.67
Col9a1Q05722 Gm38364-201ENSMUST00000191814 179 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 164.2 ms