Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir8106-201ENSMUST00000184520 139 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm43704-201ENSMUST00000196164 496 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm45420-201ENSMUST00000211243 425 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm45907-201ENSMUST00000213023 193 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm22806-201ENSMUST00000082738 136 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm26456-201ENSMUST00000082831 111 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm22353-201ENSMUST00000083918 136 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm11432-201ENSMUST00000117334 231 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm11645-201ENSMUST00000121589 649 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm12276-201ENSMUST00000121709 301 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.35□□□□□ -1.87
Col8a1Q00780 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm22611-201ENSMUST00000158288 150 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm22156-201ENSMUST00000158409 141 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm25162-201ENSMUST00000158906 159 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm21960-201ENSMUST00000181924 452 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29320-201ENSMUST00000185235 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm28339-201ENSMUST00000185845 696 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29179-202ENSMUST00000186138 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm28598-201ENSMUST00000186490 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm28057-201ENSMUST00000186603 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29448-201ENSMUST00000186675 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29314-201ENSMUST00000186800 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm28253-202ENSMUST00000187971 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm28896-201ENSMUST00000188609 696 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29268-201ENSMUST00000188669 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm29169-201ENSMUST00000189835 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm37172-201ENSMUST00000191926 615 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm17966-201ENSMUST00000193453 594 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm38107-201ENSMUST00000194873 696 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Snord80-202ENSMUST00000199023 77 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm6240-201ENSMUST00000208014 473 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm25698-201ENSMUST00000082897 107 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm23454-201ENSMUST00000083332 133 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Mir28a-201ENSMUST00000083560 86 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.35□□□□□ -1.87
Col8a1Q00780 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col8a1Q00780 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col8a1Q00780 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col8a1Q00780 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.34□□□□□ -1.87
Col8a1Q00780 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col8a1Q00780 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col8a1Q00780 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm23747-201ENSMUST00000104228 131 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm22023-201ENSMUST00000104354 130 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm13852-201ENSMUST00000122350 242 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm16218-201ENSMUST00000155424 388 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm25115-201ENSMUST00000157187 140 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm22767-201ENSMUST00000158365 165 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Mir7k-201ENSMUST00000184115 110 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm44355-201ENSMUST00000200417 104 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm45006-201ENSMUST00000206078 690 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm45778-201ENSMUST00000211959 153 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm23510-201ENSMUST00000083083 163 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Gm22294-201ENSMUST00000083308 104 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.34□□□□□ -1.87
Col8a1Q00780 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms