Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Cux1P53564 Gm11785-201ENSMUST00000120165 601 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm7350-201ENSMUST00000120964 636 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm13602-201ENSMUST00000122405 493 ntBASIC1.35□□□□□ -2.19
Cux1P53564 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.35□□□□□ -2.19
Cux1P53564 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.35□□□□□ -2.19
Cux1P53564 Mir7215-201ENSMUST00000200383 51 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm44041-201ENSMUST00000203678 396 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm45386-201ENSMUST00000210194 218 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm45375-201ENSMUST00000210338 280 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm9318-201ENSMUST00000222444 438 ntBASIC1.35□□□□□ -2.19
Cux1P53564 AC158142.3-201ENSMUST00000226230 675 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Cux1P53564 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cux1P53564 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.34□□□□□ -2.19
Cux1P53564 Gm14868-201ENSMUST00000117840 216 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Gm23463-201ENSMUST00000122468 99 ntBASIC1.34□□□□□ -2.2
Cux1P53564 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Cux1P53564 Gm16129-201ENSMUST00000152628 486 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Gm26275-201ENSMUST00000157101 268 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.34□□□□□ -2.2
Cux1P53564 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.34□□□□□ -2.2
Cux1P53564 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.34□□□□□ -2.2
Cux1P53564 Mir300-201ENSMUST00000083485 79 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.34□□□□□ -2.2
Cux1P53564 Gm26358-201ENSMUST00000158215 97 ntBASIC1.33□□□□□ -2.2
Cux1P53564 Gm18598-201ENSMUST00000207724 597 ntBASIC1.33□□□□□ -2.2
Cux1P53564 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Cux1P53564 Gm25788-201ENSMUST00000082721 131 ntBASIC1.33□□□□□ -2.2
Cux1P53564 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Cux1P53564 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm25624-201ENSMUST00000157222 275 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm34015-201ENSMUST00000194908 451 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm43286-201ENSMUST00000197420 424 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm44459-201ENSMUST00000203926 160 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm43897-201ENSMUST00000204019 309 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm45614-201ENSMUST00000209994 721 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Cux1P53564 Gm35262-201ENSMUST00000215133 267 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cux1P53564 Gm23939-201ENSMUST00000082880 133 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.32□□□□□ -2.2
Cux1P53564 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cux1P53564 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
Cux1P53564 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Cux1P53564 Gm12646-201ENSMUST00000119144 238 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm24908-201ENSMUST00000157294 127 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm24262-201ENSMUST00000157431 144 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm26348-201ENSMUST00000157528 240 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm23205-201ENSMUST00000158671 103 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm42672-201ENSMUST00000197821 352 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm44665-201ENSMUST00000205381 251 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Gm26206-201ENSMUST00000082908 110 ntBASIC1.31□□□□□ -2.2
Cux1P53564 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Cux1P53564 Gm15497-201ENSMUST00000119137 551 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Gm11572-201ENSMUST00000119164 120 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Snord13-201ENSMUST00000157627 104 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Mir6376-201ENSMUST00000185149 131 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Gm43680-201ENSMUST00000199466 340 ntBASIC1.3□□□□□ -2.2
Cux1P53564 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Cux1P53564 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.3□□□□□ -2.2
Cux1P53564 Gm20058-201ENSMUST00000186939 284 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Gm18340-201ENSMUST00000196342 609 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.3□□□□□ -2.2
Cux1P53564 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.3□□□□□ -2.2
Cux1P53564 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Cux1P53564 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.3□□□□□ -2.2
Cux1P53564 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.29□□□□□ -2.2
Cux1P53564 Gm14677-201ENSMUST00000117866 486 ntBASIC1.29□□□□□ -2.2
Cux1P53564 Gm25335-201ENSMUST00000158043 103 ntBASIC1.29□□□□□ -2.2
Cux1P53564 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Cux1P53564 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.29□□□□□ -2.2
Cux1P53564 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Cux1P53564 Gm24920-201ENSMUST00000083018 85 ntBASIC1.29□□□□□ -2.2
Cux1P53564 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Cux1P53564 Gm14049-201ENSMUST00000121009 636 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Gm24323-201ENSMUST00000175342 77 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cux1P53564 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cux1P53564 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Cux1P53564 Gm29603-201ENSMUST00000186792 334 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Gm31511-201ENSMUST00000193134 657 ntBASIC1.28□□□□□ -2.2
Cux1P53564 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.28□□□□□ -2.2
Cux1P53564 CT009733.1-201ENSMUST00000225322 425 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Cux1P53564 Gm23735-201ENSMUST00000082551 134 ntBASIC1.28□□□□□ -2.2
Cux1P53564 Gm6985-201ENSMUST00000121255 271 ntBASIC1.27□□□□□ -2.21
Cux1P53564 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.27□□□□□ -2.21
Cux1P53564 Gm23473-201ENSMUST00000158883 116 ntBASIC1.27□□□□□ -2.21
Cux1P53564 Mir3109-201ENSMUST00000175301 88 ntBASIC1.27□□□□□ -2.21
Cux1P53564 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Cux1P53564 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Cux1P53564 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms