Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm14768-201ENSMUST00000122126 678 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm13424-201ENSMUST00000122301 354 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm24630-201ENSMUST00000122768 106 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm24481-201ENSMUST00000157210 102 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm23671-201ENSMUST00000157472 103 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm23921-201ENSMUST00000175258 107 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Mir5127-201ENSMUST00000175295 71 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.6□□□□□ -1.83
Shmt1P50431 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Shmt1P50431 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.6□□□□□ -1.83
Shmt1P50431 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 LOC667541-201ENSMUST00000223408 278 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.6□□□□□ -1.83
Shmt1P50431 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Shmt1P50431 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Shmt1P50431 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.6□□□□□ -1.83
Shmt1P50431 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Shmt1P50431 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Shmt1P50431 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Shmt1P50431 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm7853-201ENSMUST00000100708 478 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm11693-201ENSMUST00000119625 565 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm15986-201ENSMUST00000122153 400 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm22611-201ENSMUST00000158288 150 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm17187-201ENSMUST00000164622 410 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm24487-201ENSMUST00000178017 63 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm44343-201ENSMUST00000196702 90 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm44322-201ENSMUST00000196830 115 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm43529-201ENSMUST00000199178 412 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm43600-201ENSMUST00000202134 223 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm45859-201ENSMUST00000212794 214 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm35405-201ENSMUST00000218754 400 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm25202-201ENSMUST00000082838 191 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Gm23041-201ENSMUST00000083868 106 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Shmt1P50431 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.59□□□□□ -1.83
Shmt1P50431 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Shmt1P50431 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Shmt1P50431 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Shmt1P50431 Gm23532-201ENSMUST00000104569 112 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Shmt1P50431 Gm13167-201ENSMUST00000118554 578 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm15029-201ENSMUST00000119742 199 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm23752-201ENSMUST00000157584 115 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm22113-201ENSMUST00000158343 104 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm24348-201ENSMUST00000158710 130 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm24264-201ENSMUST00000179835 94 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm29140-201ENSMUST00000190187 476 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.58□□□□□ -1.84
Shmt1P50431 Mir7661-201ENSMUST00000197023 61 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm44977-201ENSMUST00000205283 420 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm9712-201ENSMUST00000210842 311 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Shmt1P50431 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Gm23297-201ENSMUST00000083184 127 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Mir21a-201ENSMUST00000083521 92 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.58□□□□□ -1.84
Shmt1P50431 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.58□□□□□ -1.84
Shmt1P50431 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Shmt1P50431 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shmt1P50431 Mir881-201ENSMUST00000104844 78 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Shmt1P50431 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.57□□□□□ -1.84
Shmt1P50431 Gm24839-201ENSMUST00000122602 107 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.57□□□□□ -1.84
Shmt1P50431 Gm25066-201ENSMUST00000158145 123 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm24552-201ENSMUST00000158646 103 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm24739-201ENSMUST00000158855 292 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm22348-201ENSMUST00000178674 79 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shmt1P50431 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm27249-201ENSMUST00000185049 328 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm36946-201ENSMUST00000192706 435 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shmt1P50431 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shmt1P50431 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.57□□□□□ -1.84
Shmt1P50431 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.57□□□□□ -1.84
Shmt1P50431 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shmt1P50431 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shmt1P50431 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.57□□□□□ -1.84
Shmt1P50431 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shmt1P50431 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shmt1P50431 Gm12902-201ENSMUST00000118389 322 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm14119-201ENSMUST00000119511 235 ntBASIC3.56□□□□□ -1.84
Shmt1P50431 Gm14877-201ENSMUST00000119803 478 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms