Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rfx1P48377 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Rfx1P48377 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Rfx1P48377 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rfx1P48377 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Rfx1P48377 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rfx1P48377 Mir466h-201ENSMUST00000104748 81 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm13992-201ENSMUST00000120558 156 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm14402-201ENSMUST00000122217 508 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm22613-201ENSMUST00000122679 292 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm22315-201ENSMUST00000158010 143 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm25224-201ENSMUST00000158195 68 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm25235-201ENSMUST00000179933 107 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm27421-201ENSMUST00000184729 167 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm43853-201ENSMUST00000197162 301 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Mir376a-201ENSMUST00000197584 68 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm44524-201ENSMUST00000203899 271 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm24356-201ENSMUST00000082859 106 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Gm22294-201ENSMUST00000083308 104 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Mir137-201ENSMUST00000083635 73 ntBASIC4.44□□□□□ -1.7
Rfx1P48377 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rfx1P48377 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rfx1P48377 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rfx1P48377 Gm23836-201ENSMUST00000104434 129 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Gm15846-201ENSMUST00000116022 320 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Gm14020-201ENSMUST00000118165 662 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Gm22027-201ENSMUST00000122737 127 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Mir6414-201ENSMUST00000183685 82 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Mir3620-201ENSMUST00000184710 61 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.43□□□□□ -1.7
Rfx1P48377 Gm20734-201ENSMUST00000216939 193 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 Gm22970-201ENSMUST00000083304 186 ntBASIC4.43□□□□□ -1.7
Rfx1P48377 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Rfx1P48377 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rfx1P48377 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rfx1P48377 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Rfx1P48377 Mir541-201ENSMUST00000102097 90 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Rfx1P48377 Snord72-201ENSMUST00000104549 81 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm15183-201ENSMUST00000118933 348 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm25543-201ENSMUST00000122678 312 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm22321-201ENSMUST00000157152 104 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm22211-201ENSMUST00000158097 156 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm23257-201ENSMUST00000158322 132 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rfx1P48377 Gm20542-201ENSMUST00000174582 372 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm27921-201ENSMUST00000183968 108 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rfx1P48377 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm24626-201ENSMUST00000082621 161 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Gm24457-201ENSMUST00000083196 105 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.42□□□□□ -1.7
Rfx1P48377 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Rfx1P48377 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Rfx1P48377 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Rfx1P48377 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rfx1P48377 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm23256-201ENSMUST00000102235 110 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Mir761-201ENSMUST00000103245 76 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm26140-201ENSMUST00000103807 110 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm25269-201ENSMUST00000122601 104 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm22145-201ENSMUST00000157396 148 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm23123-201ENSMUST00000157648 144 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm25664-201ENSMUST00000157697 107 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm24727-201ENSMUST00000158231 144 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm7241-201ENSMUST00000159853 357 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm22908-201ENSMUST00000177620 110 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm28453-203ENSMUST00000187041 189 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm19123-201ENSMUST00000190716 651 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.41□□□□□ -1.7
Rfx1P48377 Mir465d-201ENSMUST00000196314 58 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm18462-201ENSMUST00000208112 417 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm10298-201ENSMUST00000074801 265 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm22507-201ENSMUST00000082773 160 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rfx1P48377 Gm44842-201ENSMUST00000209173 3372 ntBASIC4.41□□□□□ -1.7
Rfx1P48377 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Rfx1P48377 Gm12721-201ENSMUST00000120621 268 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm12443-201ENSMUST00000122308 323 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm22026-201ENSMUST00000122735 281 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm5963-201ENSMUST00000143451 236 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm23640-201ENSMUST00000157860 104 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm2962-201ENSMUST00000159266 336 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Spin2g-201ENSMUST00000178425 687 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Gm27695-201ENSMUST00000184301 91 ntBASIC4.4□□□□□ -1.71
Rfx1P48377 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Rfx1P48377 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms