Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC0.34□□□□□ -2.35
HttP42859 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC0.34□□□□□ -2.35
HttP42859 Gm22595-201ENSMUST00000104250 130 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm9001-201ENSMUST00000121642 399 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm2966-201ENSMUST00000166052 481 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm17204-201ENSMUST00000167936 478 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm22995-201ENSMUST00000179670 107 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm27861-201ENSMUST00000183920 214 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HttP42859 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HttP42859 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.34□□□□□ -2.36
HttP42859 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm43043-201ENSMUST00000196579 412 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm3010-201ENSMUST00000198805 448 ntBASIC0.34□□□□□ -2.36
HttP42859 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm21089-201ENSMUST00000215843 325 ntBASIC0.34□□□□□ -2.36
HttP42859 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm24535-201ENSMUST00000083140 107 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm23520-201ENSMUST00000093736 107 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.34□□□□□ -2.36
HttP42859 Gm16354-201ENSMUST00000155376 150 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm29231-201ENSMUST00000179850 319 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm29647-201ENSMUST00000188795 666 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm28504-201ENSMUST00000190977 666 ntBASIC0.33□□□□□ -2.36
HttP42859 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC0.33□□□□□ -2.36
HttP42859 Trbv24-201ENSMUST00000194614 347 ntBASIC0.33□□□□□ -2.36
HttP42859 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HttP42859 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HttP42859 Gm22535-201ENSMUST00000158174 119 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm5709-201ENSMUST00000177879 1165 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm43708-201ENSMUST00000198857 961 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
HttP42859 Gm44656-201ENSMUST00000208428 490 ntBASIC0.33□□□□□ -2.36
HttP42859 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HttP42859 Mir710-201ENSMUST00000102088 110 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC0.33□□□□□ -2.36
HttP42859 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.33□□□□□ -2.36
HttP42859 Gm7858-201ENSMUST00000190177 622 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm44482-201ENSMUST00000199232 103 ntBASIC0.33□□□□□ -2.36
HttP42859 Gm19118-201ENSMUST00000222554 98 ntBASIC0.33□□□□□ -2.36
HttP42859 Mir208a-201ENSMUST00000083498 83 ntBASIC0.33□□□□□ -2.36
HttP42859 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HttP42859 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
HttP42859 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.32□□□□□ -2.36
HttP42859 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.32□□□□□ -2.36
HttP42859 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.32□□□□□ -2.36
HttP42859 Snord35a-201ENSMUST00000083884 90 ntBASIC0.32□□□□□ -2.36
HttP42859 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.32□□□□□ -2.36
HttP42859 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC0.32□□□□□ -2.36
HttP42859 Gm43228-201ENSMUST00000200735 264 ntBASIC0.32□□□□□ -2.36
HttP42859 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
HttP42859 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm6113-201ENSMUST00000180319 639 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm44058-201ENSMUST00000204335 467 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm19237-201ENSMUST00000205036 1132 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm17987-201ENSMUST00000206902 603 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm45207-201ENSMUST00000207469 145 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm44910-201ENSMUST00000208451 396 ntBASIC0.31□□□□□ -2.36
HttP42859 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC0.31□□□□□ -2.36
HttP42859 AC132121.1-201ENSMUST00000220774 332 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm22477-201ENSMUST00000122569 316 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm20561-201ENSMUST00000188131 292 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm29641-201ENSMUST00000188955 259 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm43199-201ENSMUST00000200019 307 ntBASIC0.31□□□□□ -2.36
HttP42859 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.31□□□□□ -2.36
HttP42859 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm12086-201ENSMUST00000120863 228 ntBASIC0.31□□□□□ -2.36
HttP42859 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.31□□□□□ -2.36
HttP42859 Gm11813-201ENSMUST00000118586 291 ntBASIC0.3□□□□□ -2.36
HttP42859 Gm15379-201ENSMUST00000121224 648 ntBASIC0.3□□□□□ -2.36
HttP42859 Gm37029-201ENSMUST00000195773 239 ntBASIC0.3□□□□□ -2.36
HttP42859 Gm44348-201ENSMUST00000200165 122 ntBASIC0.3□□□□□ -2.36
HttP42859 Gm22507-201ENSMUST00000082773 160 ntBASIC0.3□□□□□ -2.36
HttP42859 Gm14624-201ENSMUST00000117746 192 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.29□□□□□ -2.36
HttP42859 Gm28439-201ENSMUST00000187714 876 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
HttP42859 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
HttP42859 Gm27477-201ENSMUST00000184649 143 ntBASIC0.29□□□□□ -2.36
HttP42859 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.29□□□□□ -2.36
HttP42859 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.29□□□□□ -2.36
HttP42859 Mir670-201ENSMUST00000102380 100 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm9703-201ENSMUST00000119573 343 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm17061-201ENSMUST00000163167 499 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm24207-201ENSMUST00000082781 108 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm24805-201ENSMUST00000082931 104 ntBASIC0.29□□□□□ -2.36
HttP42859 Gm14765-201ENSMUST00000121954 326 ntBASIC0.28□□□□□ -2.36
HttP42859 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC0.28□□□□□ -2.36
HttP42859 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HttP42859 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
HttP42859 Gm11404-201ENSMUST00000120872 494 ntBASIC0.28□□□□□ -2.37
HttP42859 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.28□□□□□ -2.37
HttP42859 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.28□□□□□ -2.37
HttP42859 Gm22446-201ENSMUST00000180108 104 ntBASIC0.28□□□□□ -2.37
HttP42859 Gm28257-201ENSMUST00000185244 463 ntBASIC0.28□□□□□ -2.37
HttP42859 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.28□□□□□ -2.37
HttP42859 Gm24144-201ENSMUST00000082632 111 ntBASIC0.28□□□□□ -2.37
HttP42859 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms