Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28939-201ENSMUST00000190351 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm28223-201ENSMUST00000190469 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm29092-201ENSMUST00000190768 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.8□□□□□ -1.96
Traf1P39428 Gm43626-201ENSMUST00000198575 162 ntBASIC2.8□□□□□ -1.96
Traf1P39428 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.8□□□□□ -1.96
Traf1P39428 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.8□□□□□ -1.96
Traf1P39428 Gm19118-201ENSMUST00000222554 98 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Traf1P39428 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Traf1P39428 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Traf1P39428 Gm24582-201ENSMUST00000103967 103 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm26015-201ENSMUST00000104402 125 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm14013-201ENSMUST00000119006 270 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm22527-201ENSMUST00000158816 106 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm17072-201ENSMUST00000166673 658 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Mir5118-201ENSMUST00000175551 67 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm24304-201ENSMUST00000177635 107 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm21827-201ENSMUST00000178247 423 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Traf1P39428 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Traf1P39428 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.79□□□□□ -1.96
Traf1P39428 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm44161-201ENSMUST00000203532 253 ntBASIC2.79□□□□□ -1.96
Traf1P39428 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.79□□□□□ -1.96
Traf1P39428 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm26108-201ENSMUST00000083973 191 ntBASIC2.79□□□□□ -1.96
Traf1P39428 Gm22752-201ENSMUST00000102083 109 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm26154-201ENSMUST00000102339 96 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm13331-201ENSMUST00000117500 448 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.78□□□□□ -1.96
Traf1P39428 Gm23980-201ENSMUST00000157135 158 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Mir1942-201ENSMUST00000157274 63 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm24601-201ENSMUST00000157970 143 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm22483-201ENSMUST00000157986 274 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm24846-201ENSMUST00000158033 108 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm23196-201ENSMUST00000158806 107 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm4468-201ENSMUST00000170206 294 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm25707-201ENSMUST00000175120 96 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm29073-201ENSMUST00000185563 664 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm28151-201ENSMUST00000189404 951 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm29165-201ENSMUST00000190655 664 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm29211-201ENSMUST00000191470 664 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm42925-201ENSMUST00000197359 285 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.78□□□□□ -1.96
Traf1P39428 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.78□□□□□ -1.96
Traf1P39428 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Traf1P39428 Gm26263-201ENSMUST00000083281 164 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Mir10a-201ENSMUST00000083585 110 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.78□□□□□ -1.96
Traf1P39428 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.78□□□□□ -1.96
Traf1P39428 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.78□□□□□ -1.97
Traf1P39428 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.78□□□□□ -1.97
Traf1P39428 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Traf1P39428 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Traf1P39428 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm26474-201ENSMUST00000116762 122 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm13880-201ENSMUST00000118421 474 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm14766-201ENSMUST00000121689 367 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm16355-201ENSMUST00000128606 231 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm23223-201ENSMUST00000158119 127 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm27490-201ENSMUST00000184754 128 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.77□□□□□ -1.97
Traf1P39428 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.77□□□□□ -1.97
Traf1P39428 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm44142-201ENSMUST00000203358 311 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.77□□□□□ -1.97
Traf1P39428 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm23517-201ENSMUST00000082830 192 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Gm23093-201ENSMUST00000083450 102 ntBASIC2.77□□□□□ -1.97
Traf1P39428 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.77□□□□□ -1.97
Traf1P39428 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.77□□□□□ -1.97
Traf1P39428 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Traf1P39428 Gm14848-201ENSMUST00000121850 467 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm14770-201ENSMUST00000122197 312 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm25321-201ENSMUST00000122558 102 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm24901-201ENSMUST00000158125 110 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm22841-201ENSMUST00000158443 62 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.76□□□□□ -1.97
Traf1P39428 Mir5101-201ENSMUST00000175181 83 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm27919-201ENSMUST00000185163 107 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm28951-201ENSMUST00000190742 313 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm32033-201ENSMUST00000193483 339 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Mir378a-201ENSMUST00000198300 66 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.76□□□□□ -1.97
Traf1P39428 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Gm9762-201ENSMUST00000036976 444 ntBASIC2.76□□□□□ -1.97
Traf1P39428 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Traf1P39428 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Traf1P39428 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Traf1P39428 Gm650-201ENSMUST00000144428 1551 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Traf1P39428 Gm12748-201ENSMUST00000120763 504 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm14551-201ENSMUST00000120802 256 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm25325-201ENSMUST00000122559 86 ntBASIC2.75□□□□□ -1.97
Traf1P39428 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms