Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.96□□□□□ -2.1
P20040 Gm12550-201ENSMUST00000118478 329 ntBASIC1.95□□□□□ -2.1
P20040 Gm13804-201ENSMUST00000119552 172 ntBASIC1.95□□□□□ -2.1
P20040 Gm13903-201ENSMUST00000120945 193 ntBASIC1.95□□□□□ -2.1
P20040 Gm12872-201ENSMUST00000121835 320 ntBASIC1.95□□□□□ -2.1
P20040 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.95□□□□□ -2.1
P20040 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.95□□□□□ -2.1
P20040 Gm22389-201ENSMUST00000158193 301 ntBASIC1.95□□□□□ -2.1
P20040 Gm23196-201ENSMUST00000158806 107 ntBASIC1.95□□□□□ -2.1
P20040 Gm8532-201ENSMUST00000179174 461 ntBASIC1.95□□□□□ -2.1
P20040 Gm28951-201ENSMUST00000190742 313 ntBASIC1.95□□□□□ -2.1
P20040 Gm32033-201ENSMUST00000193483 339 ntBASIC1.95□□□□□ -2.1
P20040 Gm17906-201ENSMUST00000202480 901 ntBASIC1.95□□□□□ -2.1
P20040 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
P20040 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.95□□□□□ -2.1
P20040 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.95□□□□□ -2.1
P20040 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.95□□□□□ -2.1
P20040 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.95□□□□□ -2.1
P20040 Gm26263-201ENSMUST00000083281 164 ntBASIC1.95□□□□□ -2.1
P20040 Gm22866-201ENSMUST00000083947 177 ntBASIC1.95□□□□□ -2.1
P20040 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
P20040 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
P20040 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.95□□□□□ -2.1
P20040 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
P20040 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.94□□□□□ -2.1
P20040 Gm15211-201ENSMUST00000118932 528 ntBASIC1.94□□□□□ -2.1
P20040 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.94□□□□□ -2.1
P20040 Gm14366-201ENSMUST00000121970 730 ntBASIC1.94□□□□□ -2.1
P20040 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.94□□□□□ -2.1
P20040 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.94□□□□□ -2.1
P20040 Gm22668-201ENSMUST00000158716 260 ntBASIC1.94□□□□□ -2.1
P20040 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.94□□□□□ -2.1
P20040 Gm23144-201ENSMUST00000180226 107 ntBASIC1.94□□□□□ -2.1
P20040 Gm24518-201ENSMUST00000180275 94 ntBASIC1.94□□□□□ -2.1
P20040 Gm23862-201ENSMUST00000180342 94 ntBASIC1.94□□□□□ -2.1
P20040 Mir7068-201ENSMUST00000183439 74 ntBASIC1.94□□□□□ -2.1
P20040 Mir496b-201ENSMUST00000184935 113 ntBASIC1.94□□□□□ -2.1
P20040 Gm2719-201ENSMUST00000191929 444 ntBASIC1.94□□□□□ -2.1
P20040 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.94□□□□□ -2.1
P20040 Gm44282-201ENSMUST00000203199 190 ntBASIC1.94□□□□□ -2.1
P20040 Gm43978-201ENSMUST00000203491 451 ntBASIC1.94□□□□□ -2.1
P20040 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.94□□□□□ -2.1
P20040 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.94□□□□□ -2.1
P20040 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.94□□□□□ -2.1
P20040 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.94□□□□□ -2.1
P20040 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.94□□□□□ -2.1
P20040 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.94□□□□□ -2.1
P20040 Gm24698-201ENSMUST00000083883 130 ntBASIC1.94□□□□□ -2.1
P20040 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.94□□□□□ -2.1
P20040 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.93□□□□□ -2.1
P20040 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.93□□□□□ -2.1
P20040 Gm26342-201ENSMUST00000104557 129 ntBASIC1.93□□□□□ -2.1
P20040 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
P20040 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.93□□□□□ -2.1
P20040 Gm14785-201ENSMUST00000120185 539 ntBASIC1.93□□□□□ -2.1
P20040 Gm11389-201ENSMUST00000121407 430 ntBASIC1.93□□□□□ -2.1
P20040 Gm25325-201ENSMUST00000122559 86 ntBASIC1.93□□□□□ -2.1
P20040 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.93□□□□□ -2.1
P20040 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.93□□□□□ -2.1
P20040 Gm25961-201ENSMUST00000157174 135 ntBASIC1.93□□□□□ -2.1
P20040 Gm24997-201ENSMUST00000157910 105 ntBASIC1.93□□□□□ -2.1
P20040 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.93□□□□□ -2.1
P20040 Gm27399-201ENSMUST00000184250 78 ntBASIC1.93□□□□□ -2.1
P20040 Gm43529-201ENSMUST00000199178 412 ntBASIC1.93□□□□□ -2.1
P20040 Mir7215-201ENSMUST00000200383 51 ntBASIC1.93□□□□□ -2.1
P20040 Gm44024-201ENSMUST00000203008 476 ntBASIC1.93□□□□□ -2.1
P20040 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.93□□□□□ -2.1
P20040 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.93□□□□□ -2.1
P20040 Gm9318-201ENSMUST00000222444 438 ntBASIC1.93□□□□□ -2.1
P20040 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.93□□□□□ -2.1
P20040 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.93□□□□□ -2.1
P20040 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
P20040 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.93□□□□□ -2.1
P20040 Gm24889-201ENSMUST00000104388 132 ntBASIC1.92□□□□□ -2.1
P20040 Gm3788-201ENSMUST00000119949 136 ntBASIC1.92□□□□□ -2.1
P20040 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.92□□□□□ -2.1
P20040 Gm14775-201ENSMUST00000122089 310 ntBASIC1.92□□□□□ -2.1
P20040 Gm24937-201ENSMUST00000122597 134 ntBASIC1.92□□□□□ -2.1
P20040 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.92□□□□□ -2.1
P20040 Gm6059-201ENSMUST00000196903 340 ntBASIC1.92□□□□□ -2.1
P20040 Gm43708-201ENSMUST00000198857 961 ntBASIC1.92□□□□□ -2.1
P20040 Gm7039-201ENSMUST00000205138 346 ntBASIC1.92□□□□□ -2.1
P20040 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
P20040 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.92□□□□□ -2.1
P20040 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.92□□□□□ -2.1
P20040 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
P20040 Gm24268-201ENSMUST00000082990 110 ntBASIC1.92□□□□□ -2.1
P20040 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
P20040 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
P20040 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.91□□□□□ -2.1
P20040 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.91□□□□□ -2.1
P20040 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
P20040 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
P20040 Gm23472-201ENSMUST00000101806 191 ntBASIC1.91□□□□□ -2.1
P20040 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.91□□□□□ -2.1
P20040 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
P20040 Gm14748-201ENSMUST00000119819 411 ntBASIC1.91□□□□□ -2.1
P20040 Gm7916-201ENSMUST00000120325 456 ntBASIC1.91□□□□□ -2.1
P20040 Gm14551-201ENSMUST00000120802 256 ntBASIC1.91□□□□□ -2.1
P20040 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms