Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Msx1P13297 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Gm42862-201ENSMUST00000197494 2621 ntBASIC4.32□□□□□ -1.72
Msx1P13297 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx1P13297 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Msx1P13297 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Msx1P13297 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Msx1P13297 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm13567-201ENSMUST00000118026 247 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm15861-201ENSMUST00000120979 339 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm13092-201ENSMUST00000136346 260 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm26347-201ENSMUST00000157526 131 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25098-201ENSMUST00000177580 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm23356-201ENSMUST00000177610 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24027-201ENSMUST00000177611 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22511-201ENSMUST00000177628 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22630-201ENSMUST00000177781 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm23560-201ENSMUST00000177782 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25462-201ENSMUST00000177833 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm26059-201ENSMUST00000177865 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22255-201ENSMUST00000177933 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25146-201ENSMUST00000177976 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25523-201ENSMUST00000178044 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24585-201ENSMUST00000178104 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22627-201ENSMUST00000178127 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22912-201ENSMUST00000178242 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24866-201ENSMUST00000178338 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22524-201ENSMUST00000178357 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25710-201ENSMUST00000178367 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm23575-201ENSMUST00000178406 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24872-201ENSMUST00000178434 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22449-201ENSMUST00000178924 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24702-201ENSMUST00000178965 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24206-201ENSMUST00000179011 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24528-201ENSMUST00000179164 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm22909-201ENSMUST00000179190 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm26334-201ENSMUST00000179403 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25463-201ENSMUST00000179405 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25742-201ENSMUST00000179530 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25209-201ENSMUST00000179576 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm26392-201ENSMUST00000179661 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25230-201ENSMUST00000179740 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm26434-201ENSMUST00000179778 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm25741-201ENSMUST00000179825 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24759-201ENSMUST00000179827 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm24219-201ENSMUST00000179861 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.31□□□□□ -1.72
Msx1P13297 Gm37791-201ENSMUST00000195081 286 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm42666-201ENSMUST00000201954 152 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.31□□□□□ -1.72
Msx1P13297 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Msx1P13297 Gm22299-201ENSMUST00000082663 136 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm23254-201ENSMUST00000097244 79 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Msx1P13297 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Msx1P13297 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.31□□□□□ -1.72
Msx1P13297 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Msx1P13297 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Msx1P13297 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Msx1P13297 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Msx1P13297 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Msx1P13297 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Msx1P13297 Gm13761-201ENSMUST00000117238 807 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Msx1P13297 Gm24751-201ENSMUST00000157844 102 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm24959-201ENSMUST00000157924 146 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm22536-201ENSMUST00000158171 134 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC4.3□□□□□ -1.72
Msx1P13297 Gm25464-201ENSMUST00000175481 107 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Msx1P13297 Mir6399-201ENSMUST00000184050 84 ntBASIC4.3□□□□□ -1.72
Msx1P13297 CT033781.2-201ENSMUST00000221113 153 ntBASIC4.3□□□□□ -1.72
Msx1P13297 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.3□□□□□ -1.72
Msx1P13297 AC122834.1-201ENSMUST00000227182 425 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Snord21-201ENSMUST00000082519 94 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Gm22155-201ENSMUST00000083836 162 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Msx1P13297 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Msx1P13297 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.3□□□□□ -1.72
Msx1P13297 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Msx1P13297 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Msx1P13297 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms