Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Mir146-201ENSMUST00000083667 65 ntBASIC4.22□□□□□ -1.73
RaraP11416 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RaraP11416 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RaraP11416 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RaraP11416 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RaraP11416 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RaraP11416 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RaraP11416 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RaraP11416 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RaraP11416 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RaraP11416 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
RaraP11416 Mir761-201ENSMUST00000103245 76 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm11645-201ENSMUST00000121589 649 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm26171-201ENSMUST00000158422 131 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm23023-201ENSMUST00000158767 109 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm22531-201ENSMUST00000158819 140 ntBASIC4.21□□□□□ -1.74
RaraP11416 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RaraP11416 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RaraP11416 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.21□□□□□ -1.74
RaraP11416 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.21□□□□□ -1.74
RaraP11416 Gm43220-201ENSMUST00000199299 282 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm23453-201ENSMUST00000083326 106 ntBASIC4.21□□□□□ -1.74
RaraP11416 Mir30e-201ENSMUST00000083475 92 ntBASIC4.21□□□□□ -1.74
RaraP11416 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.21□□□□□ -1.74
RaraP11416 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RaraP11416 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RaraP11416 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
RaraP11416 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RaraP11416 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RaraP11416 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.2□□□□□ -1.74
RaraP11416 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RaraP11416 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.2□□□□□ -1.74
RaraP11416 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RaraP11416 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RaraP11416 Gm25726-201ENSMUST00000104529 129 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm23178-201ENSMUST00000116782 95 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm11566-201ENSMUST00000118550 203 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm3788-201ENSMUST00000119949 136 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm22107-201ENSMUST00000122548 100 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm14562-201ENSMUST00000129885 543 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm23713-201ENSMUST00000157353 70 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm22615-201ENSMUST00000158102 70 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm26200-201ENSMUST00000180273 79 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RaraP11416 Gm37923-201ENSMUST00000191624 161 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm38238-201ENSMUST00000194334 346 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.2□□□□□ -1.74
RaraP11416 Mir7682-201ENSMUST00000198467 58 ntBASIC4.2□□□□□ -1.74
RaraP11416 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm18462-201ENSMUST00000208112 417 ntBASIC4.2□□□□□ -1.74
RaraP11416 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.2□□□□□ -1.74
RaraP11416 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.2□□□□□ -1.74
RaraP11416 AC151902.2-201ENSMUST00000226419 301 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm24356-201ENSMUST00000082859 106 ntBASIC4.2□□□□□ -1.74
RaraP11416 Mir34b-201ENSMUST00000083558 84 ntBASIC4.2□□□□□ -1.74
RaraP11416 Gm23875-201ENSMUST00000083711 318 ntBASIC4.2□□□□□ -1.74
RaraP11416 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RaraP11416 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RaraP11416 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
RaraP11416 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.19□□□□□ -1.74
RaraP11416 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RaraP11416 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.19□□□□□ -1.74
RaraP11416 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.19□□□□□ -1.74
RaraP11416 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RaraP11416 Gm4736-201ENSMUST00000100870 380 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm23697-201ENSMUST00000103897 110 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm14593-201ENSMUST00000119948 294 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm25104-201ENSMUST00000122476 163 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm22320-201ENSMUST00000157149 312 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC4.19□□□□□ -1.74
RaraP11416 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.19□□□□□ -1.74
RaraP11416 Gm43746-201ENSMUST00000200028 317 ntBASIC4.19□□□□□ -1.74
RaraP11416 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.19□□□□□ -1.74
RaraP11416 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 Gm44563-201ENSMUST00000207958 178 ntBASIC4.19□□□□□ -1.74
RaraP11416 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 Gm25200-201ENSMUST00000083094 130 ntBASIC4.19□□□□□ -1.74
RaraP11416 Snord22-201ENSMUST00000083153 126 ntBASIC4.19□□□□□ -1.74
RaraP11416 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RaraP11416 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.19□□□□□ -1.74
RaraP11416 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RaraP11416 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RaraP11416 Gm24263-201ENSMUST00000104059 107 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm12252-201ENSMUST00000119517 219 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm12304-201ENSMUST00000120312 385 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm25543-201ENSMUST00000122678 312 ntBASIC4.18□□□□□ -1.74
RaraP11416 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms