Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm8129-201ENSMUST00000118230 213 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm6025-201ENSMUST00000121517 201 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm14916-201ENSMUST00000121904 204 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23655-201ENSMUST00000122627 105 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23121-201ENSMUST00000157653 173 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24959-201ENSMUST00000157924 146 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25605-201ENSMUST00000158364 124 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25098-201ENSMUST00000177580 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23356-201ENSMUST00000177610 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24027-201ENSMUST00000177611 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22511-201ENSMUST00000177628 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22630-201ENSMUST00000177781 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23560-201ENSMUST00000177782 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-6-201ENSMUST00000177790 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25462-201ENSMUST00000177833 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm26059-201ENSMUST00000177865 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22255-201ENSMUST00000177933 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25146-201ENSMUST00000177976 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25523-201ENSMUST00000178044 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-3-201ENSMUST00000178082 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24585-201ENSMUST00000178104 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22627-201ENSMUST00000178127 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22912-201ENSMUST00000178242 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24866-201ENSMUST00000178338 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22524-201ENSMUST00000178357 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25710-201ENSMUST00000178367 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23575-201ENSMUST00000178406 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24872-201ENSMUST00000178434 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-7-201ENSMUST00000178635 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22449-201ENSMUST00000178924 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24702-201ENSMUST00000178965 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24206-201ENSMUST00000179011 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24528-201ENSMUST00000179164 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm22909-201ENSMUST00000179190 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-10-201ENSMUST00000179320 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-5-201ENSMUST00000179352 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm26334-201ENSMUST00000179403 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25463-201ENSMUST00000179405 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-2-201ENSMUST00000179447 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25742-201ENSMUST00000179530 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25209-201ENSMUST00000179576 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm26392-201ENSMUST00000179661 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25230-201ENSMUST00000179740 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-9-201ENSMUST00000179752 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm26434-201ENSMUST00000179778 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm25741-201ENSMUST00000179825 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24759-201ENSMUST00000179827 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm24219-201ENSMUST00000179861 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-4-201ENSMUST00000179923 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Mir467a-8-201ENSMUST00000180070 83 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm37670-201ENSMUST00000193622 229 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm38259-201ENSMUST00000194602 3534 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.57□□□□□ -1.84
Hoxd3P09027 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hoxd3P09027 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm26327-201ENSMUST00000093724 111 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm23254-201ENSMUST00000097244 79 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.57□□□□□ -1.84
Hoxd3P09027 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hoxd3P09027 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Hoxd3P09027 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Hoxd3P09027 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Hoxd3P09027 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm22004-201ENSMUST00000101884 107 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm26011-201ENSMUST00000104410 104 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm24892-201ENSMUST00000122747 104 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm23230-201ENSMUST00000157298 133 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm23101-201ENSMUST00000157550 137 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm24877-201ENSMUST00000158779 116 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm25646-201ENSMUST00000178527 79 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm27286-201ENSMUST00000184934 179 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm42834-201ENSMUST00000196845 256 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm44261-201ENSMUST00000203337 209 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm2522-201ENSMUST00000204280 322 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm43898-201ENSMUST00000204456 424 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Gm22950-201ENSMUST00000082776 107 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Mir338-201ENSMUST00000083666 98 ntBASIC3.56□□□□□ -1.84
Hoxd3P09027 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hoxd3P09027 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Hoxd3P09027 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms