Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.34□□□□□ -1.87
P04946 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.34□□□□□ -1.87
P04946 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.34□□□□□ -1.87
P04946 Gm1833-201ENSMUST00000191608 682 ntBASIC3.34□□□□□ -1.87
P04946 Gm19901-201ENSMUST00000192191 495 ntBASIC3.34□□□□□ -1.87
P04946 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.34□□□□□ -1.87
P04946 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.34□□□□□ -1.87
P04946 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
P04946 Gm3829-201ENSMUST00000222362 619 ntBASIC3.34□□□□□ -1.87
P04946 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.34□□□□□ -1.87
P04946 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
P04946 Gm26495-201ENSMUST00000083152 137 ntBASIC3.34□□□□□ -1.87
P04946 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.34□□□□□ -1.87
P04946 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
P04946 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.34□□□□□ -1.88
P04946 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
P04946 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
P04946 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
P04946 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
P04946 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
P04946 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.33□□□□□ -1.88
P04946 Gm24263-201ENSMUST00000104059 107 ntBASIC3.33□□□□□ -1.88
P04946 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
P04946 Gm14562-201ENSMUST00000129885 543 ntBASIC3.33□□□□□ -1.88
P04946 Gm24726-201ENSMUST00000158232 121 ntBASIC3.33□□□□□ -1.88
P04946 Gm26171-201ENSMUST00000158422 131 ntBASIC3.33□□□□□ -1.88
P04946 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.33□□□□□ -1.88
P04946 Gm22367-201ENSMUST00000178930 132 ntBASIC3.33□□□□□ -1.88
P04946 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.33□□□□□ -1.88
P04946 Gm27189-201ENSMUST00000184119 190 ntBASIC3.33□□□□□ -1.88
P04946 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.33□□□□□ -1.88
P04946 Gm37923-201ENSMUST00000191624 161 ntBASIC3.33□□□□□ -1.88
P04946 Gm37001-201ENSMUST00000193377 190 ntBASIC3.33□□□□□ -1.88
P04946 Gm37239-201ENSMUST00000193510 141 ntBASIC3.33□□□□□ -1.88
P04946 Snord80-202ENSMUST00000199023 77 ntBASIC3.33□□□□□ -1.88
P04946 Gm43220-201ENSMUST00000199299 282 ntBASIC3.33□□□□□ -1.88
P04946 Gm9377-201ENSMUST00000207227 623 ntBASIC3.33□□□□□ -1.88
P04946 Gm23039-201ENSMUST00000083870 161 ntBASIC3.33□□□□□ -1.88
P04946 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.33□□□□□ -1.88
P04946 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.33□□□□□ -1.88
P04946 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
P04946 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
P04946 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
P04946 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
P04946 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
P04946 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
P04946 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.32□□□□□ -1.88
P04946 Mdga2-203ENSMUST00000113942 423 ntBASIC3.32□□□□□ -1.88
P04946 Gm11874-201ENSMUST00000117437 130 ntBASIC3.32□□□□□ -1.88
P04946 Gm13831-201ENSMUST00000118764 302 ntBASIC3.32□□□□□ -1.88
P04946 Gm15268-201ENSMUST00000118845 352 ntBASIC3.32□□□□□ -1.88
P04946 Gm12335-201ENSMUST00000119738 327 ntBASIC3.32□□□□□ -1.88
P04946 Gm14593-201ENSMUST00000119948 294 ntBASIC3.32□□□□□ -1.88
P04946 Gm22107-201ENSMUST00000122548 100 ntBASIC3.32□□□□□ -1.88
P04946 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.32□□□□□ -1.88
P04946 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.32□□□□□ -1.88
P04946 Gm22215-201ENSMUST00000157558 96 ntBASIC3.32□□□□□ -1.88
P04946 Gm24998-201ENSMUST00000157908 89 ntBASIC3.32□□□□□ -1.88
P04946 Gm25456-201ENSMUST00000157952 109 ntBASIC3.32□□□□□ -1.88
P04946 Gm22501-201ENSMUST00000158981 127 ntBASIC3.32□□□□□ -1.88
P04946 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
P04946 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.32□□□□□ -1.88
P04946 Gm27773-201ENSMUST00000184087 78 ntBASIC3.32□□□□□ -1.88
P04946 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
P04946 Gm37343-201ENSMUST00000192542 111 ntBASIC3.32□□□□□ -1.88
P04946 Gm45013-201ENSMUST00000206883 178 ntBASIC3.32□□□□□ -1.88
P04946 Gm19366-201ENSMUST00000206996 156 ntBASIC3.32□□□□□ -1.88
P04946 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.32□□□□□ -1.88
P04946 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.32□□□□□ -1.88
P04946 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.32□□□□□ -1.88
P04946 Gm18441-201ENSMUST00000223539 617 ntBASIC3.32□□□□□ -1.88
P04946 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
P04946 Gm22620-201ENSMUST00000082700 133 ntBASIC3.32□□□□□ -1.88
P04946 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
P04946 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
P04946 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
P04946 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.32□□□□□ -1.88
P04946 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.32□□□□□ -1.88
P04946 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
P04946 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
P04946 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
P04946 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
P04946 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
P04946 Gm22779-201ENSMUST00000104085 107 ntBASIC3.31□□□□□ -1.88
P04946 Gm13737-201ENSMUST00000119793 232 ntBASIC3.31□□□□□ -1.88
P04946 Gm14629-201ENSMUST00000122428 144 ntBASIC3.31□□□□□ -1.88
P04946 Gm8840-201ENSMUST00000122454 386 ntBASIC3.31□□□□□ -1.88
P04946 Gm23540-201ENSMUST00000157543 164 ntBASIC3.31□□□□□ -1.88
P04946 Gm25935-201ENSMUST00000178746 107 ntBASIC3.31□□□□□ -1.88
P04946 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
P04946 Gm38238-201ENSMUST00000194334 346 ntBASIC3.31□□□□□ -1.88
P04946 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.31□□□□□ -1.88
P04946 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
P04946 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.31□□□□□ -1.88
P04946 Gm34779-201ENSMUST00000210036 263 ntBASIC3.31□□□□□ -1.88
P04946 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.31□□□□□ -1.88
P04946 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.31□□□□□ -1.88
P04946 Gm9174-201ENSMUST00000078149 255 ntBASIC3.31□□□□□ -1.88
P04946 Gm24626-201ENSMUST00000082621 161 ntBASIC3.31□□□□□ -1.88
P04946 Gm25930-201ENSMUST00000082785 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms