Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.53□□□□□ -2.16
CopeO89079 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CopeO89079 Gm23246-201ENSMUST00000083371 67 ntBASIC1.53□□□□□ -2.16
CopeO89079 Snord7-201ENSMUST00000083781 97 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
CopeO89079 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
CopeO89079 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CopeO89079 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.52□□□□□ -2.17
CopeO89079 Gm23718-201ENSMUST00000157350 307 ntBASIC1.52□□□□□ -2.17
CopeO89079 Gm22217-201ENSMUST00000157556 313 ntBASIC1.52□□□□□ -2.17
CopeO89079 Gm23221-201ENSMUST00000158118 93 ntBASIC1.52□□□□□ -2.17
CopeO89079 Gm24348-201ENSMUST00000158710 130 ntBASIC1.52□□□□□ -2.17
CopeO89079 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.52□□□□□ -2.17
CopeO89079 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.52□□□□□ -2.17
CopeO89079 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
CopeO89079 Gm28466-201ENSMUST00000190678 659 ntBASIC1.52□□□□□ -2.17
CopeO89079 Gm44844-201ENSMUST00000207242 336 ntBASIC1.52□□□□□ -2.17
CopeO89079 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.52□□□□□ -2.17
CopeO89079 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.52□□□□□ -2.17
CopeO89079 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CopeO89079 Gm24805-201ENSMUST00000082931 104 ntBASIC1.52□□□□□ -2.17
CopeO89079 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CopeO89079 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CopeO89079 Gm26147-201ENSMUST00000104479 114 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm11854-201ENSMUST00000117839 446 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm14852-201ENSMUST00000120065 647 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm2768-201ENSMUST00000121062 250 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm23713-201ENSMUST00000157353 70 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm22615-201ENSMUST00000158102 70 ntBASIC1.51□□□□□ -2.17
CopeO89079 Mir669n-201ENSMUST00000158636 54 ntBASIC1.51□□□□□ -2.17
CopeO89079 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.51□□□□□ -2.17
CopeO89079 Mir6382-201ENSMUST00000184055 110 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm45240-201ENSMUST00000211437 674 ntBASIC1.51□□□□□ -2.17
CopeO89079 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.51□□□□□ -2.17
CopeO89079 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.51□□□□□ -2.17
CopeO89079 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.51□□□□□ -2.17
CopeO89079 Mir19a-201ENSMUST00000083482 82 ntBASIC1.51□□□□□ -2.17
CopeO89079 Mir148b-201ENSMUST00000083626 97 ntBASIC1.51□□□□□ -2.17
CopeO89079 Gm10360-201ENSMUST00000097219 272 ntBASIC1.51□□□□□ -2.17
CopeO89079 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CopeO89079 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
CopeO89079 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CopeO89079 Gm23043-201ENSMUST00000157890 109 ntBASIC1.5□□□□□ -2.17
CopeO89079 Gm22389-201ENSMUST00000158193 301 ntBASIC1.5□□□□□ -2.17
CopeO89079 Gm8114-201ENSMUST00000172225 484 ntBASIC1.5□□□□□ -2.17
CopeO89079 Gm25156-201ENSMUST00000179809 79 ntBASIC1.5□□□□□ -2.17
CopeO89079 Gm18433-201ENSMUST00000192747 197 ntBASIC1.5□□□□□ -2.17
CopeO89079 Trbv7-201ENSMUST00000193339 402 ntBASIC1.5□□□□□ -2.17
CopeO89079 Gm44384-201ENSMUST00000200208 114 ntBASIC1.5□□□□□ -2.17
CopeO89079 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.5□□□□□ -2.17
CopeO89079 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.5□□□□□ -2.17
CopeO89079 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CopeO89079 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm22761-201ENSMUST00000102278 96 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm13439-201ENSMUST00000117541 409 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm2003-201ENSMUST00000118537 636 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm6587-201ENSMUST00000120219 613 ntBASIC1.49□□□□□ -2.17
CopeO89079 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm2020-201ENSMUST00000145242 579 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm25625-201ENSMUST00000157221 96 ntBASIC1.49□□□□□ -2.17
CopeO89079 Mir5118-201ENSMUST00000175551 67 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm44609-201ENSMUST00000207157 460 ntBASIC1.49□□□□□ -2.17
CopeO89079 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm18242-201ENSMUST00000218455 542 ntBASIC1.49□□□□□ -2.17
CopeO89079 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.49□□□□□ -2.17
CopeO89079 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.49□□□□□ -2.17
CopeO89079 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm23454-201ENSMUST00000083332 133 ntBASIC1.49□□□□□ -2.17
CopeO89079 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CopeO89079 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm14599-201ENSMUST00000120469 474 ntBASIC1.48□□□□□ -2.17
CopeO89079 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.48□□□□□ -2.17
CopeO89079 Gm23558-201ENSMUST00000157823 80 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm25020-201ENSMUST00000178071 107 ntBASIC1.48□□□□□ -2.17
CopeO89079 Mir7068-201ENSMUST00000183439 74 ntBASIC1.48□□□□□ -2.17
CopeO89079 Mir6399-201ENSMUST00000184050 84 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm28439-201ENSMUST00000187714 876 ntBASIC1.48□□□□□ -2.17
CopeO89079 Mir3068-202ENSMUST00000197755 79 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm46312-201ENSMUST00000220961 420 ntBASIC1.48□□□□□ -2.17
CopeO89079 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.48□□□□□ -2.17
CopeO89079 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CopeO89079 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.48□□□□□ -2.17
CopeO89079 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
CopeO89079 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CopeO89079 Gm22543-201ENSMUST00000104347 94 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm23202-201ENSMUST00000104376 129 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm12351-201ENSMUST00000118727 292 ntBASIC1.47□□□□□ -2.17
CopeO89079 Mir1942-201ENSMUST00000157274 63 ntBASIC1.47□□□□□ -2.17
CopeO89079 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CopeO89079 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CopeO89079 Gm24333-201ENSMUST00000175101 84 ntBASIC1.47□□□□□ -2.17
CopeO89079 Snord87-201ENSMUST00000175437 87 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm27959-201ENSMUST00000185172 111 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm29950-201ENSMUST00000195273 237 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm9236-201ENSMUST00000196892 587 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm33866-201ENSMUST00000196911 289 ntBASIC1.47□□□□□ -2.17
CopeO89079 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms