Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ClppO88696 Gm22831-201ENSMUST00000102473 109 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm22270-201ENSMUST00000104034 132 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm11065-201ENSMUST00000111462 228 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm13355-201ENSMUST00000117996 317 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm14293-201ENSMUST00000118528 577 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.37□□□□□ -2.03
ClppO88696 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
ClppO88696 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.37□□□□□ -2.03
ClppO88696 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.37□□□□□ -2.03
ClppO88696 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
ClppO88696 Gm24082-201ENSMUST00000175175 83 ntBASIC2.37□□□□□ -2.03
ClppO88696 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm23862-201ENSMUST00000180342 94 ntBASIC2.37□□□□□ -2.03
ClppO88696 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm27490-201ENSMUST00000184754 128 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm8151-201ENSMUST00000184817 871 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.37□□□□□ -2.03
ClppO88696 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.37□□□□□ -2.03
ClppO88696 Gm8747-201ENSMUST00000195392 751 ntBASIC2.37□□□□□ -2.03
ClppO88696 Mir378a-201ENSMUST00000198300 66 ntBASIC2.37□□□□□ -2.03
ClppO88696 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.37□□□□□ -2.03
ClppO88696 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ClppO88696 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.37□□□□□ -2.03
ClppO88696 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm23093-201ENSMUST00000083450 102 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm26166-201ENSMUST00000083788 107 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm23042-201ENSMUST00000083866 101 ntBASIC2.37□□□□□ -2.03
ClppO88696 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.37□□□□□ -2.03
ClppO88696 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ClppO88696 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm15844-201ENSMUST00000118016 576 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm8858-201ENSMUST00000118259 342 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm12513-201ENSMUST00000118617 352 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm14301-201ENSMUST00000120181 324 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm12443-201ENSMUST00000122308 323 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm25866-201ENSMUST00000158245 112 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm15914-201ENSMUST00000161922 309 ntBASIC2.36□□□□□ -2.03
ClppO88696 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm23933-201ENSMUST00000178405 79 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm29184-201ENSMUST00000190038 334 ntBASIC2.36□□□□□ -2.03
ClppO88696 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm38261-201ENSMUST00000192608 316 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.36□□□□□ -2.03
ClppO88696 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.36□□□□□ -2.03
ClppO88696 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ClppO88696 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm19118-201ENSMUST00000222554 98 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm23247-201ENSMUST00000083373 107 ntBASIC2.36□□□□□ -2.03
ClppO88696 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ClppO88696 Mir687-201ENSMUST00000102166 89 ntBASIC2.35□□□□□ -2.03
ClppO88696 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ClppO88696 Gm14013-201ENSMUST00000119006 270 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm12806-201ENSMUST00000119384 268 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm23429-201ENSMUST00000122486 149 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.35□□□□□ -2.03
ClppO88696 Gm22793-201ENSMUST00000157227 330 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm23642-201ENSMUST00000157858 258 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm22517-201ENSMUST00000158265 136 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm23005-201ENSMUST00000158950 136 ntBASIC2.35□□□□□ -2.03
ClppO88696 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ClppO88696 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ClppO88696 Gm16232-201ENSMUST00000162856 167 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm17072-201ENSMUST00000166673 658 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm27959-201ENSMUST00000185172 111 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm38238-201ENSMUST00000194334 346 ntBASIC2.35□□□□□ -2.03
ClppO88696 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm23370-202ENSMUST00000197008 129 ntBASIC2.35□□□□□ -2.03
ClppO88696 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.35□□□□□ -2.03
ClppO88696 Gm44524-201ENSMUST00000203899 271 ntBASIC2.35□□□□□ -2.03
ClppO88696 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.35□□□□□ -2.03
ClppO88696 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.35□□□□□ -2.03
ClppO88696 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.35□□□□□ -2.03
ClppO88696 Gm46389-201ENSMUST00000223199 392 ntBASIC2.35□□□□□ -2.03
ClppO88696 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.35□□□□□ -2.03
ClppO88696 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ClppO88696 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ClppO88696 Gm23097-201ENSMUST00000083448 105 ntBASIC2.35□□□□□ -2.03
ClppO88696 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
ClppO88696 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
ClppO88696 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
ClppO88696 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.34□□□□□ -2.03
ClppO88696 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm23469-201ENSMUST00000157131 104 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm23752-201ENSMUST00000157584 115 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm25707-201ENSMUST00000175120 96 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm6660-201ENSMUST00000179149 468 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
ClppO88696 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ClppO88696 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.34□□□□□ -2.03
ClppO88696 Gm29950-201ENSMUST00000195273 237 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm42925-201ENSMUST00000197359 285 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm45252-201ENSMUST00000211579 397 ntBASIC2.34□□□□□ -2.03
ClppO88696 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm26263-201ENSMUST00000083281 164 ntBASIC2.34□□□□□ -2.03
ClppO88696 Gm22353-201ENSMUST00000083918 136 ntBASIC2.34□□□□□ -2.03
ClppO88696 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
ClppO88696 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.34□□□□□ -2.04
ClppO88696 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms