Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm27245-201ENSMUST00000184385 376 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm27964-201ENSMUST00000185195 62 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm38154-201ENSMUST00000195444 340 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm45912-201ENSMUST00000210646 543 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm45240-201ENSMUST00000211437 674 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm46312-201ENSMUST00000220961 420 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.1□□□□□ -2.23
Hmgb3O54879 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm24865-201ENSMUST00000103246 96 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm25759-201ENSMUST00000103988 129 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm14852-201ENSMUST00000120065 647 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm2855-201ENSMUST00000166765 456 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm42647-201ENSMUST00000195939 459 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Mir3068-202ENSMUST00000197755 79 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm42774-201ENSMUST00000198854 283 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Hmgb3O54879 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Hmgb3O54879 Gm22997-201ENSMUST00000082845 107 ntBASIC1.09□□□□□ -2.23
Hmgb3O54879 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Hmgb3O54879 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.09□□□□□ -2.24
Hmgb3O54879 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Mir1904-201ENSMUST00000122702 80 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm26414-201ENSMUST00000157674 269 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Mir669n-201ENSMUST00000158636 54 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm27711-201ENSMUST00000183802 118 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm19709-201ENSMUST00000215403 482 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Hmgb3O54879 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm26265-201ENSMUST00000083277 135 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.08□□□□□ -2.24
Hmgb3O54879 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Hmgb3O54879 Gm23202-201ENSMUST00000104376 129 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm13378-201ENSMUST00000117483 336 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm13885-201ENSMUST00000117569 187 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm14785-201ENSMUST00000120185 539 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm22663-201ENSMUST00000158721 102 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Hmgb3O54879 Mir6335-201ENSMUST00000184081 98 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm43652-201ENSMUST00000196219 675 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm7692-201ENSMUST00000213534 409 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm22980-201ENSMUST00000082608 70 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm23741-201ENSMUST00000097237 171 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Hmgb3O54879 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.07□□□□□ -2.24
Hmgb3O54879 Mir883a-201ENSMUST00000104824 76 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm22678-201ENSMUST00000116974 101 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm14879-201ENSMUST00000117308 507 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm15878-201ENSMUST00000127561 306 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm16129-201ENSMUST00000152628 486 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm15279-201ENSMUST00000155593 288 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm23122-201ENSMUST00000157645 103 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm24858-201ENSMUST00000158058 323 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm24677-201ENSMUST00000158755 150 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm24573-201ENSMUST00000175499 112 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm29397-201ENSMUST00000185205 333 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm43026-201ENSMUST00000202972 325 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm45101-201ENSMUST00000208327 232 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm45387-201ENSMUST00000209792 632 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm18488-201ENSMUST00000215082 364 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm26175-201ENSMUST00000083794 131 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.06□□□□□ -2.24
Hmgb3O54879 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Hmgb3O54879 Gm23907-201ENSMUST00000104595 189 ntBASIC1.05□□□□□ -2.24
Hmgb3O54879 Gm15452-201ENSMUST00000119877 240 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms