Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm23245-201ENSMUST00000083370 135 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm23058-201ENSMUST00000093703 107 ntBASIC1.16□□□□□ -2.22
DffaO54786 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
DffaO54786 Gm5396-201ENSMUST00000121222 532 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.15□□□□□ -2.23
DffaO54786 Gm26348-201ENSMUST00000157528 240 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm25365-201ENSMUST00000158852 121 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.15□□□□□ -2.23
DffaO54786 Snord87-201ENSMUST00000175437 87 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm22392-201ENSMUST00000177971 107 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm28000-201ENSMUST00000184380 85 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.15□□□□□ -2.23
DffaO54786 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.15□□□□□ -2.23
DffaO54786 Gm45730-201ENSMUST00000212560 395 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.15□□□□□ -2.23
DffaO54786 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.15□□□□□ -2.23
DffaO54786 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.15□□□□□ -2.23
DffaO54786 Mir29c-201ENSMUST00000083614 88 ntBASIC1.15□□□□□ -2.23
DffaO54786 Gm25008-201ENSMUST00000083809 81 ntBASIC1.15□□□□□ -2.23
DffaO54786 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
DffaO54786 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
DffaO54786 Gm22780-201ENSMUST00000104084 132 ntBASIC1.14□□□□□ -2.23
DffaO54786 Mdga2-203ENSMUST00000113942 423 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.14□□□□□ -2.23
DffaO54786 Gm15211-201ENSMUST00000118932 528 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm16359-201ENSMUST00000124511 289 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm22098-201ENSMUST00000157930 85 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm26029-201ENSMUST00000158659 132 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm26365-201ENSMUST00000179177 94 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
DffaO54786 Mir6381-201ENSMUST00000183426 87 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm27878-201ENSMUST00000184000 106 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm37771-201ENSMUST00000193121 265 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm23370-202ENSMUST00000197008 129 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.14□□□□□ -2.23
DffaO54786 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
DffaO54786 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.14□□□□□ -2.23
DffaO54786 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.14□□□□□ -2.23
DffaO54786 Gm42807-201ENSMUST00000200141 329 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm44825-201ENSMUST00000207557 150 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm44598-201ENSMUST00000207566 150 ntBASIC1.14□□□□□ -2.23
DffaO54786 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.14□□□□□ -2.23
DffaO54786 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.14□□□□□ -2.23
DffaO54786 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.14□□□□□ -2.23
DffaO54786 Gm26327-201ENSMUST00000093724 111 ntBASIC1.14□□□□□ -2.23
DffaO54786 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
DffaO54786 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
DffaO54786 Gm22779-201ENSMUST00000104085 107 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm11575-201ENSMUST00000122243 228 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm23381-201ENSMUST00000157676 94 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm24677-201ENSMUST00000158755 150 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm26363-201ENSMUST00000158866 83 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm23967-201ENSMUST00000175062 78 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm25069-201ENSMUST00000175238 86 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm25730-201ENSMUST00000178753 165 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm21171-201ENSMUST00000180048 673 ntBASIC1.13□□□□□ -2.23
DffaO54786 Mir6370-201ENSMUST00000183510 120 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm27419-201ENSMUST00000184576 109 ntBASIC1.13□□□□□ -2.23
DffaO54786 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
DffaO54786 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
DffaO54786 Gm10298-201ENSMUST00000074801 265 ntBASIC1.13□□□□□ -2.23
DffaO54786 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
DffaO54786 Gm6923-201ENSMUST00000118343 406 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm6587-201ENSMUST00000120219 613 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm13903-201ENSMUST00000120945 193 ntBASIC1.12□□□□□ -2.23
DffaO54786 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm25220-201ENSMUST00000157546 95 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm26487-201ENSMUST00000158022 94 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm25333-201ENSMUST00000158035 246 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm24773-201ENSMUST00000158513 99 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm26189-201ENSMUST00000179879 107 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm24969-201ENSMUST00000180331 79 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28838-201ENSMUST00000186338 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm29635-201ENSMUST00000187221 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm29026-201ENSMUST00000187787 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28797-201ENSMUST00000188543 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28855-201ENSMUST00000188680 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28705-201ENSMUST00000189548 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28939-201ENSMUST00000190351 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm28223-201ENSMUST00000190469 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm29092-201ENSMUST00000190768 315 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm19649-201ENSMUST00000201126 822 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm30738-201ENSMUST00000221346 502 ntBASIC1.12□□□□□ -2.23
DffaO54786 Gm21937-201ENSMUST00000222825 218 ntBASIC1.12□□□□□ -2.23
DffaO54786 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.12□□□□□ -2.23
DffaO54786 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.12□□□□□ -2.23
DffaO54786 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.12□□□□□ -2.23
DffaO54786 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
DffaO54786 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.11□□□□□ -2.23
DffaO54786 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
DffaO54786 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
DffaO54786 Mir343-201ENSMUST00000102360 75 ntBASIC1.11□□□□□ -2.23
DffaO54786 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
DffaO54786 Gm23636-201ENSMUST00000175070 95 ntBASIC1.11□□□□□ -2.23
DffaO54786 Gm23267-201ENSMUST00000178490 132 ntBASIC1.11□□□□□ -2.23
DffaO54786 Gm21758-201ENSMUST00000179336 819 ntBASIC1.11□□□□□ -2.23
DffaO54786 Mir7683-201ENSMUST00000183842 61 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms