Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Mir3968-201ENSMUST00000175355 100 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm43659-201ENSMUST00000200894 628 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm43979-201ENSMUST00000203179 475 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm44050-201ENSMUST00000204263 527 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
Sdc4O35988 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Sdc4O35988 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.22□□□□□ -2.21
Sdc4O35988 Gm25541-201ENSMUST00000116888 126 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm14657-201ENSMUST00000117461 302 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.21□□□□□ -2.22
Sdc4O35988 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.21□□□□□ -2.22
Sdc4O35988 Gm24056-201ENSMUST00000158617 146 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm26189-201ENSMUST00000179879 107 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm28196-201ENSMUST00000187719 640 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm44483-201ENSMUST00000197203 97 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm44391-201ENSMUST00000198490 93 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Gm19326-201ENSMUST00000219818 326 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.21□□□□□ -2.22
Sdc4O35988 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Sdc4O35988 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Sdc4O35988 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Sdc4O35988 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Sdc4O35988 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Sdc4O35988 Gm11352-201ENSMUST00000119264 517 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm12096-201ENSMUST00000121149 829 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Sdc4O35988 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.2□□□□□ -2.22
Sdc4O35988 Mir1949-201ENSMUST00000157434 141 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm25334-201ENSMUST00000158036 110 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm25768-201ENSMUST00000158570 98 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm16162-201ENSMUST00000162296 297 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm20415-201ENSMUST00000172877 423 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm25120-201ENSMUST00000180148 79 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Sdc4O35988 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.2□□□□□ -2.22
Sdc4O35988 Gm31230-201ENSMUST00000199725 785 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Platr25-208ENSMUST00000222602 939 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm22247-201ENSMUST00000082476 131 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm22980-201ENSMUST00000082608 70 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm23104-201ENSMUST00000083722 104 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm23040-201ENSMUST00000083869 163 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.2□□□□□ -2.22
Sdc4O35988 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Sdc4O35988 Gm26143-201ENSMUST00000104480 108 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm25981-201ENSMUST00000157921 295 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm23760-201ENSMUST00000158350 116 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Sdc4O35988 Gm25069-201ENSMUST00000175238 86 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Sdc4O35988 Gm9022-202ENSMUST00000183285 483 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Mir6411-201ENSMUST00000183556 108 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm27711-201ENSMUST00000183802 118 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Sdc4O35988 Gm31511-201ENSMUST00000193134 657 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm19649-201ENSMUST00000201126 822 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm44182-201ENSMUST00000204052 115 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Sdc4O35988 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.19□□□□□ -2.22
Sdc4O35988 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Sdc4O35988 Gm14360-201ENSMUST00000120670 393 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.18□□□□□ -2.22
Sdc4O35988 Gm23328-201ENSMUST00000157418 132 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm22485-201ENSMUST00000157990 109 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Sdc4O35988 Gm24080-201ENSMUST00000175178 232 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm29288-201ENSMUST00000191582 901 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm43955-201ENSMUST00000204332 142 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm2446-201ENSMUST00000220144 772 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.18□□□□□ -2.22
Sdc4O35988 Gm24622-201ENSMUST00000082619 162 ntBASIC1.18□□□□□ -2.22
Sdc4O35988 Gm12393-201ENSMUST00000117084 848 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm11784-201ENSMUST00000118568 474 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm11857-201ENSMUST00000119817 324 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm12044-201ENSMUST00000120335 213 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm14366-201ENSMUST00000121970 730 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Sdc4O35988 Gm23332-201ENSMUST00000157424 275 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm22136-201ENSMUST00000158751 268 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm17038-201ENSMUST00000166586 494 ntBASIC1.17□□□□□ -2.22
Sdc4O35988 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.17□□□□□ -2.22
Sdc4O35988 Gm27861-201ENSMUST00000183920 214 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms