Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clcn6O35454 Gm22677-201ENSMUST00000116977 108 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm13787-201ENSMUST00000120422 168 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm26478-201ENSMUST00000122611 133 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm23755-201ENSMUST00000157578 343 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm22122-201ENSMUST00000175147 200 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm22411-201ENSMUST00000175462 126 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm22002-201ENSMUST00000175622 125 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Mir6350-201ENSMUST00000183639 105 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Trbv25-201ENSMUST00000194700 273 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC5.45□□□□□ -1.54
Clcn6O35454 Gm38670-201ENSMUST00000199248 77 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clcn6O35454 AC158597.1-201ENSMUST00000216234 150 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC5.45□□□□□ -1.54
Clcn6O35454 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clcn6O35454 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clcn6O35454 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Clcn6O35454 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.45□□□□□ -1.54
Clcn6O35454 AC153887.2-201ENSMUST00000219160 3838 ntBASIC5.45□□□□□ -1.54
Clcn6O35454 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clcn6O35454 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clcn6O35454 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Clcn6O35454 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Clcn6O35454 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Gm24230-201ENSMUST00000104313 129 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm13533-201ENSMUST00000121104 177 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Mir1970-201ENSMUST00000157839 104 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm43441-201ENSMUST00000201458 205 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm44132-201ENSMUST00000205142 151 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm44921-201ENSMUST00000205290 301 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.44□□□□□ -1.54
Clcn6O35454 Gm45777-201ENSMUST00000213009 301 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Gm23330-201ENSMUST00000082660 164 ntBASIC5.44□□□□□ -1.54
Clcn6O35454 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Clcn6O35454 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Clcn6O35454 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Clcn6O35454 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Clcn6O35454 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Clcn6O35454 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 Gm44846-201ENSMUST00000207127 3243 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 Gm22779-201ENSMUST00000104085 107 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm25919-201ENSMUST00000104271 132 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm12469-201ENSMUST00000117623 207 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm15772-201ENSMUST00000118533 438 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC5.43□□□□□ -1.54
Clcn6O35454 Gm24649-201ENSMUST00000157106 134 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm25391-201ENSMUST00000157342 134 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.43□□□□□ -1.54
Clcn6O35454 Gm23370-202ENSMUST00000197008 129 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm24805-201ENSMUST00000082931 104 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Gm23570-201ENSMUST00000083029 104 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.43□□□□□ -1.54
Clcn6O35454 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Clcn6O35454 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Clcn6O35454 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clcn6O35454 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Clcn6O35454 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clcn6O35454 Gm26074-201ENSMUST00000104063 129 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Gm24235-201ENSMUST00000104319 129 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Gm6079-201ENSMUST00000121356 404 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Gm23589-201ENSMUST00000157660 105 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Mir28b-201ENSMUST00000175399 80 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Gm38011-201ENSMUST00000193312 279 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Snora41-201ENSMUST00000082668 132 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Gm25682-201ENSMUST00000083942 164 ntBASIC5.42□□□□□ -1.54
Clcn6O35454 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clcn6O35454 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clcn6O35454 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Clcn6O35454 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clcn6O35454 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Clcn6O35454 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Clcn6O35454 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clcn6O35454 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clcn6O35454 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.41□□□□□ -1.54
Clcn6O35454 Gm23630-201ENSMUST00000175292 104 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.41□□□□□ -1.54
Clcn6O35454 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.41□□□□□ -1.54
Clcn6O35454 Gm43865-201ENSMUST00000204721 127 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 AC183096.2-201ENSMUST00000228733 457 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 Mir133b-201ENSMUST00000083546 119 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 Gm25337-201ENSMUST00000083723 104 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.41□□□□□ -1.54
Clcn6O35454 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clcn6O35454 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms