Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3027-201ENSMUST00000167579 451 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm16399-201ENSMUST00000181423 219 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm28344-201ENSMUST00000185704 279 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm20811-201ENSMUST00000190500 553 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm23100-201ENSMUST00000083455 141 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm24951-201ENSMUST00000102182 109 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm22074-201ENSMUST00000158595 113 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Mir6376-201ENSMUST00000185149 131 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm43096-201ENSMUST00000196173 421 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Mir7215-201ENSMUST00000200383 51 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm6590-201ENSMUST00000203343 687 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.57□□□□□ -2.32
Ccdc180J3QNE4 Gm4732-201ENSMUST00000118778 473 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm25544-201ENSMUST00000122676 120 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm43708-201ENSMUST00000198857 961 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm14761-201ENSMUST00000121363 262 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm22560-201ENSMUST00000157332 120 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm29397-201ENSMUST00000185205 333 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm43407-201ENSMUST00000199816 317 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm45366-201ENSMUST00000209828 384 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 Gm3867-201ENSMUST00000086108 279 ntBASIC0.56□□□□□ -2.32
Ccdc180J3QNE4 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Mir1949-201ENSMUST00000157434 141 ntBASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Gm17154-201ENSMUST00000165748 431 ntBASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Gm7346-201ENSMUST00000169661 476 ntBASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Mir1291-201ENSMUST00000199842 117 ntBASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.55□□□□□ -2.32
Ccdc180J3QNE4 Gm14884-201ENSMUST00000120456 196 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm14840-201ENSMUST00000122135 594 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm7846-201ENSMUST00000145844 274 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm23020-201ENSMUST00000158766 253 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm31511-201ENSMUST00000193134 657 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm44274-201ENSMUST00000203417 256 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Gm25099-201ENSMUST00000093716 116 ntBASIC0.54□□□□□ -2.32
Ccdc180J3QNE4 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 Snord87-201ENSMUST00000175437 87 ntBASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 Mir6399-201ENSMUST00000184050 84 ntBASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.53□□□□□ -2.32
Ccdc180J3QNE4 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Gm14885-201ENSMUST00000117969 496 ntBASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Gm12191-201ENSMUST00000118307 348 ntBASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Gm45530-201ENSMUST00000211658 225 ntBASIC0.53□□□□□ -2.33
Ccdc180J3QNE4 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.52□□□□□ -2.33
Ccdc180J3QNE4 Gm24715-201ENSMUST00000102377 95 ntBASIC0.52□□□□□ -2.33
Ccdc180J3QNE4 Gm15029-201ENSMUST00000119742 199 ntBASIC0.52□□□□□ -2.33
Ccdc180J3QNE4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Ccdc180J3QNE4 Gm27640-201ENSMUST00000184580 147 ntBASIC0.52□□□□□ -2.33
Ccdc180J3QNE4 Gm12889-201ENSMUST00000118684 241 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm24747-201ENSMUST00000157835 87 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm29299-201ENSMUST00000185609 923 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20832-201ENSMUST00000189076 665 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm7858-201ENSMUST00000190177 622 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm28408-201ENSMUST00000191557 463 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm29288-201ENSMUST00000191582 901 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm36728-201ENSMUST00000195782 665 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm43090-201ENSMUST00000202459 314 ntBASIC0.51□□□□□ -2.33
Ccdc180J3QNE4 Gm10360-201ENSMUST00000097219 272 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms