Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim55G3X8Y1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm25875-201ENSMUST00000104323 107 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm11572-201ENSMUST00000119164 120 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm23258-201ENSMUST00000158319 106 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm18341-201ENSMUST00000197538 622 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm44524-201ENSMUST00000203899 271 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm9377-201ENSMUST00000207227 623 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Mir383-201ENSMUST00000083523 70 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Trim55G3X8Y1 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm25565-201ENSMUST00000104605 105 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm14894-201ENSMUST00000117170 270 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm11566-201ENSMUST00000118550 203 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm13210-201ENSMUST00000121483 273 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm15065-201ENSMUST00000121699 273 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm24905-201ENSMUST00000158129 104 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm29428-201ENSMUST00000190086 409 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm37923-201ENSMUST00000191624 161 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm37449-201ENSMUST00000193016 270 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm18658-201ENSMUST00000195558 270 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm44977-201ENSMUST00000205283 420 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm46997-201ENSMUST00000222108 217 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Gm25078-201ENSMUST00000082530 107 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim55G3X8Y1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm25728-201ENSMUST00000104525 159 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm25316-201ENSMUST00000116826 118 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm14774-201ENSMUST00000117857 536 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm15026-201ENSMUST00000119219 458 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm23886-201ENSMUST00000122684 313 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm24818-201ENSMUST00000175093 161 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Mir5134-201ENSMUST00000175529 78 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm24799-201ENSMUST00000178431 79 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm28304-201ENSMUST00000185977 312 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm29256-201ENSMUST00000189094 312 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm28921-201ENSMUST00000190219 378 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm28484-201ENSMUST00000190606 312 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm30280-201ENSMUST00000192214 262 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm42570-201ENSMUST00000195937 292 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.72□□□□□ -1.81
Trim55G3X8Y1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Trim55G3X8Y1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm12173-201ENSMUST00000117622 273 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm24745-201ENSMUST00000157840 85 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm22766-201ENSMUST00000158372 99 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm27828-201ENSMUST00000184108 119 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim55G3X8Y1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Trim55G3X8Y1 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim55G3X8Y1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Trim55G3X8Y1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms