Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.5□□□□□ -2.17
Chd3B1AR17 Gm27964-201ENSMUST00000185195 62 ntBASIC1.5□□□□□ -2.17
Chd3B1AR17 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.5□□□□□ -2.17
Chd3B1AR17 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Chd3B1AR17 Gm25411-201ENSMUST00000083760 151 ntBASIC1.5□□□□□ -2.17
Chd3B1AR17 Gm16261-201ENSMUST00000096813 205 ntBASIC1.5□□□□□ -2.17
Chd3B1AR17 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm25497-201ENSMUST00000104425 132 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm12044-201ENSMUST00000120335 213 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm13194-201ENSMUST00000142299 311 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm42924-201ENSMUST00000197261 185 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm23452-201ENSMUST00000083327 107 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Mir343-201ENSMUST00000102360 75 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm15177-201ENSMUST00000120491 577 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm11786-201ENSMUST00000120799 155 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm25961-201ENSMUST00000157174 135 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm25637-201ENSMUST00000157529 107 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm25958-201ENSMUST00000175114 71 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Chd3B1AR17 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm23517-201ENSMUST00000082830 192 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm24412-201ENSMUST00000083426 109 ntBASIC1.49□□□□□ -2.17
Chd3B1AR17 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm13343-201ENSMUST00000116474 105 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm11785-201ENSMUST00000120165 601 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm23122-201ENSMUST00000157645 103 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm18397-201ENSMUST00000176704 587 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm26189-201ENSMUST00000179879 107 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Mir6351-201ENSMUST00000183826 99 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm29389-201ENSMUST00000191562 352 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm43228-201ENSMUST00000200735 264 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm45365-201ENSMUST00000209489 256 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm29809-201ENSMUST00000218423 493 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Chd3B1AR17 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.48□□□□□ -2.17
Chd3B1AR17 Gm15497-201ENSMUST00000119137 551 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm25334-201ENSMUST00000158036 110 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm22386-201ENSMUST00000158192 129 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm6395-201ENSMUST00000167639 691 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Mir6411-201ENSMUST00000183556 108 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm31511-201ENSMUST00000193134 657 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.47□□□□□ -2.17
Chd3B1AR17 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm17119-201ENSMUST00000163943 280 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Chd3B1AR17 Gm33354-201ENSMUST00000195448 906 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.47□□□□□ -2.17
Chd3B1AR17 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Chd3B1AR17 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Chd3B1AR17 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26504-201ENSMUST00000102033 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord13-201ENSMUST00000157627 104 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26502-201ENSMUST00000177732 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm25350-201ENSMUST00000177849 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm23446-201ENSMUST00000177977 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26201-201ENSMUST00000178047 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm24711-201ENSMUST00000178062 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm24609-201ENSMUST00000178166 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm23265-201ENSMUST00000178321 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm22812-201ENSMUST00000178329 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26246-201ENSMUST00000178388 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm25155-201ENSMUST00000178450 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm24760-201ENSMUST00000178530 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm22285-201ENSMUST00000178576 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm22417-201ENSMUST00000178656 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm26270-201ENSMUST00000178690 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm23313-201ENSMUST00000178931 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm23089-201ENSMUST00000178947 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm24153-201ENSMUST00000179280 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm25597-201ENSMUST00000179388 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Gm25816-201ENSMUST00000179764 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.46□□□□□ -2.18
Chd3B1AR17 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms