Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Snora3-201ENSMUST00000083082 132 ntBASIC0.85□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm25008-201ENSMUST00000083809 81 ntBASIC0.85□□□□□ -2.27
Trav9-4A0A0B4J1K2 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav9-4A0A0B4J1K2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 n-R5s158-201ENSMUST00000104095 118 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm12656-201ENSMUST00000118149 577 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23429-201ENSMUST00000122486 149 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23381-201ENSMUST00000157676 94 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Snord11-201ENSMUST00000158468 84 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23636-201ENSMUST00000175070 95 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Mir3086-201ENSMUST00000175072 87 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm22111-201ENSMUST00000178010 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23687-201ENSMUST00000178664 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm25730-201ENSMUST00000178753 165 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm24566-201ENSMUST00000179286 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23305-201ENSMUST00000179342 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm26389-201ENSMUST00000179819 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm22130-201ENSMUST00000179979 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm22393-201ENSMUST00000180153 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm25085-201ENSMUST00000180298 79 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm28404-201ENSMUST00000190242 453 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm43955-201ENSMUST00000204332 142 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm17991-201ENSMUST00000208139 297 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm25636-201ENSMUST00000082666 133 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Snord14a-201ENSMUST00000082807 87 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Gm23246-201ENSMUST00000083371 67 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.84□□□□□ -2.27
Trav9-4A0A0B4J1K2 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm7429-201ENSMUST00000118664 348 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm6587-201ENSMUST00000120219 613 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm26349-201ENSMUST00000157530 130 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22527-201ENSMUST00000158816 106 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm21171-201ENSMUST00000180048 673 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm27711-201ENSMUST00000183802 118 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28000-201ENSMUST00000184380 85 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28825-201ENSMUST00000186233 238 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm44320-201ENSMUST00000199276 86 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm44011-201ENSMUST00000203336 394 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.83□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm23691-201ENSMUST00000101878 107 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir653-201ENSMUST00000102402 85 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm25759-201ENSMUST00000103988 129 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm13482-201ENSMUST00000119842 254 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm6025-201ENSMUST00000121517 201 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14366-201ENSMUST00000121970 730 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm26348-201ENSMUST00000157528 240 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22136-201ENSMUST00000158751 268 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm2878-201ENSMUST00000170173 486 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm25069-201ENSMUST00000175238 86 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm21758-201ENSMUST00000179336 819 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir6381-201ENSMUST00000183426 87 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29397-201ENSMUST00000185205 333 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29647-201ENSMUST00000188795 666 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm20832-201ENSMUST00000189076 665 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28241-201ENSMUST00000190916 235 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28504-201ENSMUST00000190977 666 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm35843-201ENSMUST00000193716 666 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm36728-201ENSMUST00000195782 665 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm42454-201ENSMUST00000196805 1181 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm7692-201ENSMUST00000213534 409 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.82□□□□□ -2.28
Trav9-4A0A0B4J1K2 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mup-ps14-201ENSMUST00000118437 532 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm15211-201ENSMUST00000118932 528 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm26089-201ENSMUST00000157898 107 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm22537-201ENSMUST00000158172 199 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm23339-201ENSMUST00000158962 139 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Traj60-201ENSMUST00000167781 54 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Mir6341-201ENSMUST00000183490 121 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28200-201ENSMUST00000187778 315 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm29378-201ENSMUST00000188723 315 ntBASIC0.81□□□□□ -2.28
Trav9-4A0A0B4J1K2 Gm28909-201ENSMUST00000189406 315 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms