Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm7065-201ENSMUST00000222150 474 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24068-201ENSMUST00000104513 132 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm13368-201ENSMUST00000122443 430 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23713-201ENSMUST00000157353 70 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23752-201ENSMUST00000157584 115 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24846-201ENSMUST00000158033 108 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm22615-201ENSMUST00000158102 70 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm22527-201ENSMUST00000158816 106 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm25368-201ENSMUST00000158847 131 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm15914-201ENSMUST00000161922 309 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24518-201ENSMUST00000180275 94 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm29640-201ENSMUST00000187972 278 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37000-201ENSMUST00000193058 428 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm38333-201ENSMUST00000193608 604 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm9377-201ENSMUST00000207227 623 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm29809-201ENSMUST00000218423 493 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm26228-201ENSMUST00000082512 107 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm25080-201ENSMUST00000082526 107 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm25518-201ENSMUST00000083864 107 ntBASIC1.59□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm23472-201ENSMUST00000101806 191 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm13331-201ENSMUST00000117500 448 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm12370-201ENSMUST00000117809 604 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm14770-201ENSMUST00000122197 312 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm22389-201ENSMUST00000158193 301 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm22076-201ENSMUST00000158601 84 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm24497-201ENSMUST00000177868 191 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm25939-201ENSMUST00000179876 191 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Mir7016-201ENSMUST00000184308 72 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm29013-201ENSMUST00000187431 237 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm45013-201ENSMUST00000206883 178 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm2676-201ENSMUST00000207279 606 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm7692-201ENSMUST00000213534 409 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm22978-201ENSMUST00000082607 160 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm23444-201ENSMUST00000082922 191 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm23040-201ENSMUST00000083869 163 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.58□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm12550-201ENSMUST00000118478 329 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm13903-201ENSMUST00000120945 193 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm25102-201ENSMUST00000122479 112 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm23429-201ENSMUST00000122486 149 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm24237-201ENSMUST00000157790 132 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm22159-201ENSMUST00000158412 130 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Mir6379-201ENSMUST00000183392 115 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm27399-201ENSMUST00000184250 78 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Mir496b-201ENSMUST00000184935 113 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm43708-201ENSMUST00000198857 961 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm44830-201ENSMUST00000207667 584 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm18774-201ENSMUST00000218269 601 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Gm25402-201ENSMUST00000082966 131 ntBASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trbv1A0A0B4J1G7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trbv1A0A0B4J1G7 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.56□□□□□ -2.16
Trbv1A0A0B4J1G7 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms