Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm25308-201ENSMUST00000104171 158 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm42606-201ENSMUST00000114209 239 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm14624-201ENSMUST00000117746 192 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm14574-201ENSMUST00000120644 279 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm23000-201ENSMUST00000157083 139 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm26278-201ENSMUST00000157098 132 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm23704-201ENSMUST00000158844 340 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Mir691-201ENSMUST00000199719 78 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm23404-201ENSMUST00000082543 97 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm26458-201ENSMUST00000082832 128 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm25698-201ENSMUST00000082897 107 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm23454-201ENSMUST00000083332 133 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
H2afb1S4R1E0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm14602-201ENSMUST00000118625 340 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm11556-201ENSMUST00000120751 288 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm12693-201ENSMUST00000121965 483 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm23168-201ENSMUST00000157156 143 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm22791-201ENSMUST00000157232 145 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm22257-201ENSMUST00000158687 301 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm3470-201ENSMUST00000160819 420 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm24813-201ENSMUST00000175310 84 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm21171-201ENSMUST00000180048 673 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm27869-201ENSMUST00000184327 122 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm28700-201ENSMUST00000187614 579 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm28843-201ENSMUST00000189198 678 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm29546-201ENSMUST00000191171 678 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm44060-201ENSMUST00000204440 410 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm19252-201ENSMUST00000204705 305 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.44□□□□□ -2.02
H2afb1S4R1E0 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.44□□□□□ -2.02
H2afb1S4R1E0 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm23911-201ENSMUST00000104596 134 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm22651-201ENSMUST00000157872 94 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm20673-201ENSMUST00000177167 430 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm28661-201ENSMUST00000188231 681 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm42647-201ENSMUST00000195939 459 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Mir208a-201ENSMUST00000083498 83 ntBASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
H2afb1S4R1E0 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm7164-201ENSMUST00000117503 450 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24596-201ENSMUST00000122504 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm25270-201ENSMUST00000122606 138 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm23137-201ENSMUST00000157559 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24138-201ENSMUST00000157572 114 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24436-201ENSMUST00000157889 302 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24584-201ENSMUST00000157972 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm22891-201ENSMUST00000158641 164 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Mir5099-201ENSMUST00000175257 74 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm25211-201ENSMUST00000177553 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24540-201ENSMUST00000177627 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm25256-201ENSMUST00000177746 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm22822-201ENSMUST00000177941 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Rnu6-201ENSMUST00000178023 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm23151-201ENSMUST00000178061 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm23402-201ENSMUST00000178130 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm25245-201ENSMUST00000178139 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm24753-201ENSMUST00000178183 107 ntBASIC2.42□□□□□ -2.02
H2afb1S4R1E0 Gm25829-201ENSMUST00000178275 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms