Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm16431-201ENSMUST00000117454 431 ntBASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm14923-201ENSMUST00000118270 155 ntBASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm37684-201ENSMUST00000192779 355 ntBASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm42834-201ENSMUST00000196845 256 ntBASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Scn8aQ9WTU3 Gm13602-201ENSMUST00000122405 493 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm8121-201ENSMUST00000153583 499 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm2446-201ENSMUST00000220144 772 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm14657-201ENSMUST00000117461 302 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm13903-201ENSMUST00000120945 193 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 Gm46103-201ENSMUST00000217614 341 ntBASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn8aQ9WTU3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm11352-201ENSMUST00000119264 517 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm11786-201ENSMUST00000120799 155 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm22382-201ENSMUST00000158185 130 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm25120-201ENSMUST00000180148 79 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28838-201ENSMUST00000186338 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm29635-201ENSMUST00000187221 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm29026-201ENSMUST00000187787 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28797-201ENSMUST00000188543 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28855-201ENSMUST00000188680 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28705-201ENSMUST00000189548 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28939-201ENSMUST00000190351 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm28223-201ENSMUST00000190469 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm29092-201ENSMUST00000190768 315 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm44088-201ENSMUST00000204595 237 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm45071-201ENSMUST00000205353 571 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm23246-201ENSMUST00000083371 67 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm11785-201ENSMUST00000120165 601 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm24908-201ENSMUST00000157294 127 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm22315-201ENSMUST00000158010 143 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm24551-201ENSMUST00000158645 92 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm24969-201ENSMUST00000180331 79 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm31230-201ENSMUST00000199725 785 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn8aQ9WTU3 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Gm25976-201ENSMUST00000158695 130 ntBASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 Gm23628-201ENSMUST00000082464 173 ntBASIC1.15□□□□□ -2.23
Scn8aQ9WTU3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm37743-201ENSMUST00000194645 376 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm44391-201ENSMUST00000198490 93 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm26157-201ENSMUST00000158974 126 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm8207-201ENSMUST00000171204 502 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Mir5101-201ENSMUST00000175181 83 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm37987-201ENSMUST00000194999 825 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm18991-201ENSMUST00000209225 746 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.14□□□□□ -2.23
Scn8aQ9WTU3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm24773-201ENSMUST00000158513 99 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm29389-201ENSMUST00000191562 352 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm44459-201ENSMUST00000203926 160 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Mir421-201ENSMUST00000083575 76 ntBASIC1.13□□□□□ -2.23
Scn8aQ9WTU3 Mir22-201ENSMUST00000083595 95 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms