Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm13478-201ENSMUST00000118312 413 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm22026-201ENSMUST00000122735 281 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm25935-201ENSMUST00000178746 107 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Mir6371-201ENSMUST00000184470 111 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm42451-201ENSMUST00000197410 244 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm43749-201ENSMUST00000199345 352 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Mir208a-201ENSMUST00000083498 83 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm24164-201ENSMUST00000093663 104 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Gm7381-201ENSMUST00000098958 300 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.54□□□□□ -1.68
Prpf40aQ9R1C7 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm24067-201ENSMUST00000104514 85 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm12190-201ENSMUST00000120001 187 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm12304-201ENSMUST00000120312 385 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm23702-201ENSMUST00000158840 130 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm23053-201ENSMUST00000175136 96 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm29479-201ENSMUST00000190352 455 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm43746-201ENSMUST00000200028 317 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm18462-201ENSMUST00000208112 417 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Gm23462-201ENSMUST00000083264 104 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Prpf40aQ9R1C7 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm24586-201ENSMUST00000116695 89 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm12173-201ENSMUST00000117622 273 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm13687-201ENSMUST00000119857 282 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm25177-201ENSMUST00000122634 117 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm22097-201ENSMUST00000157929 278 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm22135-201ENSMUST00000158752 108 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm27611-201ENSMUST00000184690 108 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm27308-201ENSMUST00000184807 233 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm28924-201ENSMUST00000190012 241 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Prpf40aQ9R1C7 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm26027-201ENSMUST00000122725 268 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm22395-201ENSMUST00000177427 96 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm28304-201ENSMUST00000185977 312 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm29256-201ENSMUST00000189094 312 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm28484-201ENSMUST00000190606 312 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm17887-201ENSMUST00000200194 547 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm44563-201ENSMUST00000207958 178 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Gm18000-201ENSMUST00000212153 800 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Prpf40aQ9R1C7 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm14402-201ENSMUST00000122217 508 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm12443-201ENSMUST00000122308 323 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm22883-201ENSMUST00000157376 106 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm23277-201ENSMUST00000157914 136 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm25456-201ENSMUST00000157952 109 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Mir669k-201ENSMUST00000177742 127 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm25673-201ENSMUST00000179957 127 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Gm19901-201ENSMUST00000192191 495 ntBASIC4.5□□□□□ -1.69
Prpf40aQ9R1C7 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms