Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm21937-201ENSMUST00000222825 218 ntBASIC0.73□□□□□ -2.29
Scn11aQ9R053 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Scn11aQ9R053 Gm38274-201ENSMUST00000195689 148 ntBASIC0.73□□□□□ -2.29
Scn11aQ9R053 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.73□□□□□ -2.29
Scn11aQ9R053 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.73□□□□□ -2.29
Scn11aQ9R053 Gm23924-201ENSMUST00000082474 108 ntBASIC0.73□□□□□ -2.29
Scn11aQ9R053 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Scn11aQ9R053 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.72□□□□□ -2.29
Scn11aQ9R053 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn11aQ9R053 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.72□□□□□ -2.29
Scn11aQ9R053 Gm43228-201ENSMUST00000200735 264 ntBASIC0.72□□□□□ -2.29
Scn11aQ9R053 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.72□□□□□ -2.29
Scn11aQ9R053 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn11aQ9R053 Mir107-201ENSMUST00000083660 87 ntBASIC0.72□□□□□ -2.29
Scn11aQ9R053 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn11aQ9R053 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
Scn11aQ9R053 Gm381-201ENSMUST00000117443 2037 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Gm4916-201ENSMUST00000126139 642 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Gm21754-201ENSMUST00000177550 479 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Mir6238-201ENSMUST00000184140 129 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Gm44989-201ENSMUST00000204749 217 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Scn11aQ9R053 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.71□□□□□ -2.3
Scn11aQ9R053 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Snord43-201ENSMUST00000199549 108 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Gm44472-201ENSMUST00000204922 943 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Scn11aQ9R053 Gm15382-201ENSMUST00000118011 537 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Gm15126-201ENSMUST00000118631 833 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.7□□□□□ -2.3
Scn11aQ9R053 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Scn11aQ9R053 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Scn11aQ9R053 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.7□□□□□ -2.3
Scn11aQ9R053 Mir1967-201ENSMUST00000157789 82 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 Gm29492-201ENSMUST00000187124 457 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 Gm43090-201ENSMUST00000202459 314 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 Gm7692-201ENSMUST00000213534 409 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC0.69□□□□□ -2.3
Scn11aQ9R053 AC153506.2-201ENSMUST00000218051 257 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Scn11aQ9R053 Gm23100-201ENSMUST00000083455 141 ntBASIC0.69□□□□□ -2.3
Scn11aQ9R053 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Scn11aQ9R053 Gm12191-201ENSMUST00000118307 348 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm26236-201ENSMUST00000175536 137 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm25936-201ENSMUST00000179952 114 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Mir6896-201ENSMUST00000198033 73 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm26207-201ENSMUST00000082909 104 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm23749-201ENSMUST00000104223 131 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm22560-201ENSMUST00000157332 120 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm25035-201ENSMUST00000175414 77 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.68□□□□□ -2.3
Scn11aQ9R053 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Scn11aQ9R053 Gm14771-201ENSMUST00000118249 203 ntBASIC0.67□□□□□ -2.3
Scn11aQ9R053 Gm43245-201ENSMUST00000197603 468 ntBASIC0.67□□□□□ -2.3
Scn11aQ9R053 Gm44910-201ENSMUST00000208451 396 ntBASIC0.67□□□□□ -2.3
Scn11aQ9R053 Gm25853-201ENSMUST00000082793 132 ntBASIC0.67□□□□□ -2.3
Scn11aQ9R053 Gm11845-201ENSMUST00000117886 327 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm13541-201ENSMUST00000119519 283 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm6272-201ENSMUST00000121256 171 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm17119-201ENSMUST00000163943 280 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm38113-201ENSMUST00000193704 201 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Mir7215-201ENSMUST00000200383 51 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm21089-201ENSMUST00000215843 325 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 AC124356.2-201ENSMUST00000221874 336 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm10298-201ENSMUST00000074801 265 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Mir151-201ENSMUST00000083678 68 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.66□□□□□ -2.3
Scn11aQ9R053 Mir653-201ENSMUST00000102402 85 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm12636-201ENSMUST00000117395 624 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm11483-201ENSMUST00000119839 247 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm16399-201ENSMUST00000181423 219 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm29397-201ENSMUST00000185205 333 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm20832-201ENSMUST00000189076 665 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm31511-201ENSMUST00000193134 657 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm36728-201ENSMUST00000195782 665 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm45688-201ENSMUST00000210002 101 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 AC115878.1-201ENSMUST00000227247 334 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm26064-201ENSMUST00000083381 109 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm3867-201ENSMUST00000086108 279 ntBASIC0.65□□□□□ -2.3
Scn11aQ9R053 Gm12507-201ENSMUST00000119155 415 ntBASIC0.65□□□□□ -2.31
Scn11aQ9R053 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.65□□□□□ -2.31
Scn11aQ9R053 Gm7858-201ENSMUST00000190177 622 ntBASIC0.65□□□□□ -2.31
Scn11aQ9R053 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.65□□□□□ -2.31
Scn11aQ9R053 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Scn11aQ9R053 Snord35a-201ENSMUST00000083884 90 ntBASIC0.65□□□□□ -2.31
Scn11aQ9R053 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Scn11aQ9R053 Gm7346-201ENSMUST00000169661 476 ntBASIC0.64□□□□□ -2.31
Scn11aQ9R053 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms