Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm28843-201ENSMUST00000189198 678 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm29546-201ENSMUST00000191171 678 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm31532-201ENSMUST00000203555 767 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 AC159380.1-201ENSMUST00000218096 121 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Gm18617-201ENSMUST00000222311 259 ntBASIC0.3□□□□□ -2.36
Smco4Q9JIS3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Smco4Q9JIS3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Mir1193-201ENSMUST00000116761 121 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm13359-201ENSMUST00000119000 695 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm23329-201ENSMUST00000157415 108 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm25423-201ENSMUST00000157609 107 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm22768-201ENSMUST00000158366 153 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Snord11-201ENSMUST00000158468 84 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm24154-201ENSMUST00000175261 130 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm20698-201ENSMUST00000175657 233 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm29167-201ENSMUST00000190024 377 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Gm37399-201ENSMUST00000195224 416 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Smco4Q9JIS3 AC134335.1-201ENSMUST00000227626 329 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Mir29c-201ENSMUST00000083614 88 ntBASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Smco4Q9JIS3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm26074-201ENSMUST00000104063 129 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm15126-201ENSMUST00000118631 833 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm8161-201ENSMUST00000168739 481 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm37801-201ENSMUST00000194754 274 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 Gm43171-201ENSMUST00000199882 291 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.28□□□□□ -2.36
Smco4Q9JIS3 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm12432-201ENSMUST00000119540 186 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm12001-201ENSMUST00000121727 913 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Smco4Q9JIS3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm28200-201ENSMUST00000187778 315 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm29378-201ENSMUST00000188723 315 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm28909-201ENSMUST00000189406 315 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm38060-201ENSMUST00000194822 464 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm18488-201ENSMUST00000215082 364 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 AC121960.3-201ENSMUST00000227077 623 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm10092-201ENSMUST00000077110 180 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm23040-201ENSMUST00000083869 163 ntBASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.27□□□□□ -2.37
Smco4Q9JIS3 Gm25421-201ENSMUST00000104218 164 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm11606-201ENSMUST00000120706 617 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm24060-201ENSMUST00000157494 95 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm24808-201ENSMUST00000157993 118 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm29647-201ENSMUST00000188795 666 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm28504-201ENSMUST00000190977 666 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm44462-201ENSMUST00000199696 129 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm26206-201ENSMUST00000082908 110 ntBASIC0.26□□□□□ -2.37
Smco4Q9JIS3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Mir599-201ENSMUST00000102378 88 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Snora24-201ENSMUST00000174989 130 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm23289-201ENSMUST00000175615 108 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm8151-201ENSMUST00000184817 871 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Mir7665-201ENSMUST00000184907 63 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm29460-201ENSMUST00000188607 714 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm44128-201ENSMUST00000204909 219 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm23727-201ENSMUST00000083352 164 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Gm26176-201ENSMUST00000083795 105 ntBASIC0.25□□□□□ -2.37
Smco4Q9JIS3 Mir362-201ENSMUST00000093592 65 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms