Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.65□□□□□ -2.15
Lima1Q9ERG0 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Gm5670-201ENSMUST00000093546 372 ntBASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Lima1Q9ERG0 Mir669d-201ENSMUST00000104644 121 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm15526-201ENSMUST00000112504 204 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm14899-201ENSMUST00000118673 548 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm16412-201ENSMUST00000121602 273 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm10177-202ENSMUST00000161698 207 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Mir3964-201ENSMUST00000174898 74 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm4076-201ENSMUST00000179230 965 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm28688-201ENSMUST00000187301 268 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm28956-201ENSMUST00000189047 427 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm36966-201ENSMUST00000192217 413 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm37771-201ENSMUST00000193121 265 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm37029-201ENSMUST00000195773 239 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm44024-201ENSMUST00000203008 476 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm45101-201ENSMUST00000208327 232 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Gm24412-201ENSMUST00000083426 109 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Mir19a-201ENSMUST00000083482 82 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Mir107-201ENSMUST00000083660 87 ntBASIC1.64□□□□□ -2.15
Lima1Q9ERG0 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Lima1Q9ERG0 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm26002-201ENSMUST00000101915 107 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm11065-201ENSMUST00000111462 228 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm14774-201ENSMUST00000117857 536 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm12550-201ENSMUST00000118478 329 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Mir669n-201ENSMUST00000158636 54 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm26864-201ENSMUST00000181346 156 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Mir7679-201ENSMUST00000183379 63 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28838-201ENSMUST00000186338 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm29635-201ENSMUST00000187221 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm29026-201ENSMUST00000187787 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28797-201ENSMUST00000188543 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28855-201ENSMUST00000188680 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28705-201ENSMUST00000189548 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28939-201ENSMUST00000190351 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm28223-201ENSMUST00000190469 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm18775-201ENSMUST00000190763 586 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm29092-201ENSMUST00000190768 315 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm9377-201ENSMUST00000207227 623 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm45387-201ENSMUST00000209792 632 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Gm26327-201ENSMUST00000093724 111 ntBASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Lima1Q9ERG0 Mir758-201ENSMUST00000103260 81 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm12765-201ENSMUST00000117273 615 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm12656-201ENSMUST00000118149 577 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm15183-201ENSMUST00000118933 348 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm11786-201ENSMUST00000120799 155 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm25279-201ENSMUST00000122608 133 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm23718-201ENSMUST00000157350 307 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm24846-201ENSMUST00000158033 108 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm26024-201ENSMUST00000158657 322 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm27245-201ENSMUST00000184385 376 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Mir7241-201ENSMUST00000184532 64 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm23370-202ENSMUST00000197008 129 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Snord43-201ENSMUST00000199549 108 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm18691-201ENSMUST00000203593 872 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Gm45365-201ENSMUST00000209489 256 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.62□□□□□ -2.15
Lima1Q9ERG0 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Lima1Q9ERG0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms