Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24045-201ENSMUST00000083113 98 ntBASIC2.45□□□□□ -2.02
Scn4aQ9ER60 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Mir343-201ENSMUST00000102360 75 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm22591-201ENSMUST00000104243 106 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm26271-201ENSMUST00000158349 104 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm18551-201ENSMUST00000195594 642 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm44295-201ENSMUST00000203805 437 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm19326-201ENSMUST00000219818 326 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm24661-201ENSMUST00000083205 104 ntBASIC2.44□□□□□ -2.02
Scn4aQ9ER60 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm23015-201ENSMUST00000104145 128 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm22496-201ENSMUST00000104493 88 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm25563-201ENSMUST00000104603 74 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm11352-201ENSMUST00000119264 517 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm25279-201ENSMUST00000122608 133 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm23329-201ENSMUST00000157415 108 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm25175-201ENSMUST00000178712 79 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm29429-201ENSMUST00000187071 121 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm29640-201ENSMUST00000187972 278 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm45445-201ENSMUST00000209586 232 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.43□□□□□ -2.02
Scn4aQ9ER60 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.43□□□□□ -2.02
Scn4aQ9ER60 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm26348-201ENSMUST00000157528 240 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm27979-201ENSMUST00000185126 56 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm29013-201ENSMUST00000187431 237 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm17991-201ENSMUST00000208139 297 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm12386-201ENSMUST00000117380 688 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm14069-201ENSMUST00000120815 229 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm26414-201ENSMUST00000157674 269 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm25706-201ENSMUST00000157828 247 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm25958-201ENSMUST00000175114 71 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Mir3098-201ENSMUST00000175416 87 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Mir7663-201ENSMUST00000183950 61 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm29553-201ENSMUST00000189692 279 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm10088-201ENSMUST00000074116 423 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.42□□□□□ -2.02
Scn4aQ9ER60 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm24962-201ENSMUST00000157917 109 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm17085-201ENSMUST00000165425 502 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm27544-201ENSMUST00000185069 155 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm44961-201ENSMUST00000207450 196 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm18414-201ENSMUST00000210858 694 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm24490-201ENSMUST00000083803 98 ntBASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Scn4aQ9ER60 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm23118-201ENSMUST00000122657 187 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm25161-201ENSMUST00000158913 132 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm24713-201ENSMUST00000178850 107 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm25448-201ENSMUST00000180065 107 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm5116-201ENSMUST00000187732 463 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm29627-201ENSMUST00000187984 463 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.4□□□□□ -2.02
Scn4aQ9ER60 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.4□□□□□ -2.02
Scn4aQ9ER60 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.4□□□□□ -2.02
Scn4aQ9ER60 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.4□□□□□ -2.02
Scn4aQ9ER60 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.4□□□□□ -2.02
Scn4aQ9ER60 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm15282-201ENSMUST00000117707 300 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm17062-201ENSMUST00000166987 461 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm24137-201ENSMUST00000180055 79 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm22391-201ENSMUST00000180356 79 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Mir8106-201ENSMUST00000184520 139 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm28838-201ENSMUST00000186338 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm29635-201ENSMUST00000187221 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm29026-201ENSMUST00000187787 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm28797-201ENSMUST00000188543 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm28855-201ENSMUST00000188680 315 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm29641-201ENSMUST00000188955 259 ntBASIC2.4□□□□□ -2.03
Scn4aQ9ER60 Gm28705-201ENSMUST00000189548 315 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms