Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm43730-201ENSMUST00000199863 372 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm23625-201ENSMUST00000082457 100 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm26497-201ENSMUST00000083146 107 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Upf1Q9EPU0 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.24□□□□□ -1.73
Upf1Q9EPU0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm26100-201ENSMUST00000157245 127 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm22814-201ENSMUST00000157452 104 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm23123-201ENSMUST00000157648 144 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm23702-201ENSMUST00000158840 130 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm29334-201ENSMUST00000190334 357 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm2077-201ENSMUST00000195017 319 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm32222-201ENSMUST00000203296 298 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm44520-201ENSMUST00000205447 802 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 AC174457.1-201ENSMUST00000215932 226 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.23□□□□□ -1.73
Upf1Q9EPU0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm25316-201ENSMUST00000116826 118 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm12617-201ENSMUST00000121268 381 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm23585-201ENSMUST00000157656 102 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm24959-201ENSMUST00000157924 146 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm23196-201ENSMUST00000158806 107 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm25447-201ENSMUST00000158997 128 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm28650-201ENSMUST00000188413 411 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm30534-201ENSMUST00000217928 207 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm23517-201ENSMUST00000082830 192 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Gm26166-201ENSMUST00000083788 107 ntBASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Upf1Q9EPU0 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm8260-201ENSMUST00000119230 353 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm11448-201ENSMUST00000120427 450 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm22968-201ENSMUST00000157955 118 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm27694-201ENSMUST00000184740 86 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Upf1Q9EPU0 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Gm11819-201ENSMUST00000122192 372 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Gm22225-201ENSMUST00000157358 278 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Gm27723-201ENSMUST00000157398 63 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Upf1Q9EPU0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm13761-201ENSMUST00000117238 807 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm12025-201ENSMUST00000117768 144 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm13868-201ENSMUST00000122411 294 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm26476-201ENSMUST00000122618 313 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm24630-201ENSMUST00000122768 106 ntBASIC4.19□□□□□ -1.74
Upf1Q9EPU0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms