Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm25339-201ENSMUST00000157458 232 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Mir6376-201ENSMUST00000185149 131 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm29216-201ENSMUST00000187117 492 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm37771-201ENSMUST00000193121 265 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm29848-201ENSMUST00000203107 295 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm44990-201ENSMUST00000203922 217 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm43865-201ENSMUST00000204721 127 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Gm22978-201ENSMUST00000082607 160 ntBASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Cdc40Q9DC48 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm24430-201ENSMUST00000104077 104 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm23011-201ENSMUST00000104148 132 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm22591-201ENSMUST00000104243 106 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm13355-201ENSMUST00000117996 317 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm6444-201ENSMUST00000119611 458 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Trav20-201ENSMUST00000142754 347 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm23956-201ENSMUST00000157211 119 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm26414-201ENSMUST00000157674 269 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm24439-201ENSMUST00000157894 117 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm22099-201ENSMUST00000157925 123 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm22535-201ENSMUST00000158174 119 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm18703-201ENSMUST00000215318 333 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Gm7214-201ENSMUST00000222428 272 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Cdc40Q9DC48 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.9□□□□□ -2.1
Cdc40Q9DC48 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm14558-201ENSMUST00000117458 381 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm13439-201ENSMUST00000117541 409 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm25624-201ENSMUST00000157222 275 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm23078-201ENSMUST00000157848 148 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm24962-201ENSMUST00000157917 109 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm22527-201ENSMUST00000158816 106 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm24177-201ENSMUST00000158927 131 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm2855-201ENSMUST00000166765 456 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm22192-201ENSMUST00000175128 85 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm18396-201ENSMUST00000177095 361 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Mir6370-201ENSMUST00000183510 120 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm10193-201ENSMUST00000188288 231 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm38238-201ENSMUST00000194334 346 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm43810-201ENSMUST00000201018 232 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm45590-201ENSMUST00000209715 262 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm22810-201ENSMUST00000082741 158 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm25404-201ENSMUST00000082970 107 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm24921-201ENSMUST00000083024 107 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm25632-201ENSMUST00000083112 85 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Snora69-201ENSMUST00000083708 131 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Cdc40Q9DC48 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm15659-201ENSMUST00000118881 341 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm15183-201ENSMUST00000118933 348 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm12872-201ENSMUST00000121835 320 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm22290-201ENSMUST00000177655 107 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm22583-201ENSMUST00000178031 107 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm24713-201ENSMUST00000178850 107 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm25361-201ENSMUST00000179358 76 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm25448-201ENSMUST00000180065 107 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Mir7016-201ENSMUST00000184308 72 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm3724-201ENSMUST00000197957 349 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm18991-201ENSMUST00000209225 746 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm20304-201ENSMUST00000218168 444 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Gm9318-201ENSMUST00000222444 438 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Snord14d-201ENSMUST00000083424 86 ntBASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Cdc40Q9DC48 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm24098-201ENSMUST00000102075 109 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm25381-201ENSMUST00000102078 109 ntBASIC1.88□□□□□ -2.11
Cdc40Q9DC48 Gm22779-201ENSMUST00000104085 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms