Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm12370-201ENSMUST00000117809 604 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm13806-201ENSMUST00000117822 325 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm11522-201ENSMUST00000120533 176 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm25784-201ENSMUST00000122524 81 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm17072-201ENSMUST00000166673 658 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Mir3066-201ENSMUST00000175296 83 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm27313-201ENSMUST00000183500 142 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm28151-201ENSMUST00000189404 951 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm19252-201ENSMUST00000204705 305 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm19441-201ENSMUST00000221545 330 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm9762-201ENSMUST00000036976 444 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.7□□□□□ -1.98
Ccdc39Q9D5Y1 Gm11784-201ENSMUST00000118568 474 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm23124-201ENSMUST00000157650 107 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Cfap61-214ENSMUST00000167179 183 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm25156-201ENSMUST00000179809 79 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm46312-201ENSMUST00000220961 420 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm23614-201ENSMUST00000082598 107 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22508-201ENSMUST00000082772 110 ntBASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Ccdc39Q9D5Y1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Mir344e-201ENSMUST00000104677 66 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm13343-201ENSMUST00000116474 105 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm14362-201ENSMUST00000121679 273 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm2830-201ENSMUST00000140330 385 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm15254-201ENSMUST00000149567 273 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm23559-201ENSMUST00000157824 103 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm24137-201ENSMUST00000180055 79 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm23144-201ENSMUST00000180226 107 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22391-201ENSMUST00000180356 79 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm17946-201ENSMUST00000186856 538 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Mir7232-201ENSMUST00000197929 74 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm44295-201ENSMUST00000203805 437 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Gm24268-201ENSMUST00000082990 110 ntBASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Ccdc39Q9D5Y1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22452-201ENSMUST00000122804 104 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm25392-201ENSMUST00000157335 297 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22227-201ENSMUST00000157356 259 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Mir1927-201ENSMUST00000158579 109 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm21827-201ENSMUST00000178247 423 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm24306-201ENSMUST00000180229 79 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm26622-201ENSMUST00000180520 298 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm19193-201ENSMUST00000190263 590 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm37037-201ENSMUST00000194475 424 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm8041-201ENSMUST00000199755 616 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm43578-201ENSMUST00000201250 459 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Ear14-201ENSMUST00000049559 468 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm22572-201ENSMUST00000082985 105 ntBASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Ccdc39Q9D5Y1 Gm24126-201ENSMUST00000104111 106 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm14652-201ENSMUST00000118479 235 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm13804-201ENSMUST00000119552 172 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm11512-201ENSMUST00000119669 663 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm14588-201ENSMUST00000119895 172 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm14428-201ENSMUST00000120408 822 ntBASIC2.66□□□□□ -1.98
Ccdc39Q9D5Y1 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms