Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir878-201ENSMUST00000104680 78 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm11253-201ENSMUST00000118486 201 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm12213-201ENSMUST00000119924 353 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm26255-201ENSMUST00000122492 103 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm22277-201ENSMUST00000157204 277 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm26102-201ENSMUST00000157251 284 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm24911-201ENSMUST00000157292 136 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm24846-201ENSMUST00000158033 108 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm4468-201ENSMUST00000170206 294 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Mir6346-201ENSMUST00000183982 81 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm43510-201ENSMUST00000197922 353 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm43680-201ENSMUST00000199466 340 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Gm45403-201ENSMUST00000209453 276 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
Ddx56Q9D0R4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm15211-201ENSMUST00000118932 528 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm15497-201ENSMUST00000119137 551 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm11798-201ENSMUST00000119150 421 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm25519-201ENSMUST00000158392 127 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm28629-201ENSMUST00000187309 263 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm26457-201ENSMUST00000082678 78 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Mir101b-201ENSMUST00000083622 97 ntBASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Ddx56Q9D0R4 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm15846-201ENSMUST00000116022 320 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm13210-201ENSMUST00000121483 273 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm15065-201ENSMUST00000121699 273 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm24936-201ENSMUST00000122598 247 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm25486-201ENSMUST00000158726 63 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm20462-201ENSMUST00000172623 408 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm44223-201ENSMUST00000204854 114 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm44881-201ENSMUST00000205425 367 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm45080-201ENSMUST00000206648 283 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm45312-201ENSMUST00000210566 311 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Gm21007-201ENSMUST00000221024 326 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ddx56Q9D0R4 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm24275-201ENSMUST00000116780 146 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm22032-201ENSMUST00000116946 116 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm12693-201ENSMUST00000121965 483 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm23213-201ENSMUST00000122715 313 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm27396-201ENSMUST00000157708 58 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm9765-201ENSMUST00000043170 321 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Gm25592-201ENSMUST00000082635 131 ntBASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Ddx56Q9D0R4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm25727-201ENSMUST00000104522 131 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm11460-201ENSMUST00000118200 361 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm23331-201ENSMUST00000157423 108 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm22382-201ENSMUST00000158185 130 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm22434-201ENSMUST00000158549 122 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm5224-201ENSMUST00000183060 350 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm28534-201ENSMUST00000187744 676 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm37037-201ENSMUST00000194475 424 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm43286-201ENSMUST00000197420 424 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm40810-201ENSMUST00000219149 253 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm25896-201ENSMUST00000083713 136 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm10161-201ENSMUST00000091506 204 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.48□□□□□ -1.85
Ddx56Q9D0R4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm13672-201ENSMUST00000117554 459 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm13076-201ENSMUST00000118041 204 ntBASIC3.47□□□□□ -1.85
Ddx56Q9D0R4 Gm12819-201ENSMUST00000122223 629 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms